Nocardioides renjunii: SHK17_08520
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Entry
SHK17_08520 CDS
T10238
Name
(GenBank) ABC transporter ATP-binding protein
Organism
nrn Nocardioides renjunii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_29
RsgA_GTPase
AAA_5
AAA_25
MMR_HSR1
NACHT
nSTAND3
DUF87
nSTAND1
AAA_21
AAA_16
Zeta_toxin
AAA_18
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WQQ24019
LinkDB
All DBs
Position
complement(1770704..1774213)
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AA seq
1169 aa
AA seq
DB search
MTITEASRPTDATTSGSGLPAHRQPVDWRRVRRPLSYLCFSMSLLGAVAASLGSMVAGRL
ADSPTEGLLVLLAACVVGGAVIDTVAKTIWAGICDRAEGRLRSDLLDAAMAQPLSELSEQ
AVGEVLDRIDDDTWEVGQLMRWGVWQAARTFLASGPLWVVASLTWWPAVFLFPLTAVATF
LVVRKLLPQVALKKVVEEAAWTDHAASTEEGVAARDDLRTSLGQAHVLRRNAHLASVVHR
TLDAVLAVEVRITRRSGGLLHGALAAVGVVGVALVLSGDLSTARLVTLFLVTTMFVGGVD
MLARHLPDLQEGFGAVLRLRGMLASPAEPTGGLPVPDGPLDVEFRHLAFSYGTGTFALRD
VDLLLTAGHTCALVGRTGSGKSTLASLLSRAVEPPRGSVFLGGVDVLDLDLQQLRAAVGV
VTQRTEVLAGTLADNITLFDDAPRATVEAAVAELGLTDWVAGLPAGLDTVLGPGGTSLSA
GEEQLVAFARLLVRDVSVVVLDEATARMDPVTEARVVRAADRLIAGRTGILVAHRLSTTE
RAEQVAVLESGRVVQQGPRARLAAEEGPFRDLLAAAAHEAVVEAHHHDDSTIGSVRRSTT
PPPPPELAPTPSLARAVLHTVSIQPQWGLLGAVLFLLSSLTGAFGAITGWVWGHIVTDLQ
AGDSPGLLLLALVASLVVAPFLLAQAFRTYPHWWVEVRLRVRAAVLHGQTSQRRLLRTPP
GEVVARTMDADRLARYTDRWVDFVNGLIVAALTALIAQTWVAGAVLLTVMVVSALASTLG
RRVAGRSAAAASTARATFGQSLVSALESVRTVKLAAATPQVHQHLRDVDGGRVDAAVREH
RVQALLDGVPLVMVQCGVVAAWAGLLTGRWELATALLIANAVSGFDWFGRVAGSVVTEAP
GVRAWMNATSELAGGGDLVDLPPGVDLVAGTGPAPDRAPREPLHSLSIRDLDAIHDDGTL
GVQGVDLDVAAGELVLLLGQVGSGKSSLLGALAGLVTSTGEIRWNGEVVTDPQITLRPGR
VAHVAQVPRVLSGTFTGNVALDHPDRAVVPALEAARMGRDVAEAGGPDALVGHRGVRLSG
GQVQRLALARALAAEADVLLADDVSSALDASTEIELWHALRARGAAVIGATSKSAALAQA
DRVVVLDSGRVVDDGPWSELSARWAHLAG
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatcaccgaagcctcccgccccaccgacgcgaccacctccgggtcggggctcccc
gcacaccgccagcccgtcgactggcggcgcgtgcgccgtccgctgagctacctctgcttc
tcgatgtcgctcctcggcgccgtcgccgcgtcgctcgggtcgatggtggccggccggctc
gccgacagccccaccgagggcctgctcgtgctgctcgcggcctgcgtcgtcggcggtgcg
gtgatcgacaccgtcgccaagacgatctgggcaggcatctgcgaccgggccgagggccgg
ctccgctccgacctgctcgacgccgcgatggcccagccgctctccgagctctccgagcag
gccgtcggcgaggtgctcgaccgcatcgacgacgacacctgggaggtcggccagctgatg
cgctggggcgtctggcaggcggcgcgcacgttcttggcctccggcccgctgtgggtggtc
gcgtccctgacctggtggccggcggtcttcctcttcccgctgacggcggtcgcgacgttc
ctcgtcgtccgcaagctgctgccccaggtggcgctcaagaaggtggtcgaggaggccgcc
tggaccgaccacgccgcctccacggaggagggcgtggccgcccgcgacgacctccgcacg
tcgctgggccaggcccacgtcctgcgccgcaacgctcacctggcctccgtcgtccaccgc
accctcgacgcggtgctggccgtcgaggtccgcatcacccgccgcagcggcggcctgctc
cacggcgccctcgccgcggtcggcgtcgtcggcgtggcgctggtgctgtccggcgacctg
tcgaccgcgcggctggtgaccctcttcctcgtcacgacgatgttcgtcggcggcgtcgac
atgctcgcccgccacctgcccgacctccaagagggcttcggcgcggtgctccggctgcgc
gggatgctggcctcgccggccgagccgaccggcggcctccccgtgcccgacggtccactc
gacgtggagttccgccacctcgcgttcagctacggcaccggcaccttcgcgctacgcgac
gtcgacctgctgctcaccgccggccacacgtgcgcgctcgtgggccgcaccggctccggc
aagtcgaccctcgcctcgctgctctcccgcgccgtcgagccgccccgcggctcggtcttc
ctcggcggcgtcgacgtgctcgacctcgacctgcagcagctgcgggccgccgtcggcgtc
gtcacgcagcgcaccgaggtcctcgccggcacgctcgccgacaacatcaccctgttcgac
gacgcgccccgcgccaccgtcgaggcggcggtcgccgagctcggcctcaccgactgggtc
gccggcctccccgcgggcctcgacaccgtcctcggacccgggggcaccagcctgtcggca
ggcgaggagcagctggtcgccttcgcccggctcctcgtgcgcgacgtcagcgtcgtcgtc
ctcgacgaggcgaccgcccggatggacccggtcaccgaggcccgcgtcgtccgtgccgcc
gaccgcctgatcgccggacgcaccggcatcctcgtcgcccaccggctctccaccaccgag
cgcgccgagcaggtcgccgtgctcgagtccggccgtgtcgtccagcagggcccccgggcg
cggctcgcggccgaggagggtcccttccgcgacctcctcgcggccgccgcccacgaggcg
gtcgtcgaggcgcaccaccacgacgactccacgatcgggtcggtgcgccgcagcacgact
cccccgccgccgcccgagctcgcgcccaccccgagcctggccagggcggtgctccacacc
gtgagcatccagccgcagtgggggctgctgggcgccgtgctcttcctgctgtcctccctc
accggtgccttcggcgccatcacgggctgggtctggggacacatcgtcaccgacctccag
gccggggacagcccggggctgctcctgctcgcgctggtcgcctcgctggtggtcgcgccg
ttcctgctcgcccaggcgttccgcacctacccccactggtgggtcgaggtgcggctccgg
gtgcgtgcggcggtgctccacggccagacctcgcagcgtcgcctgctccgcacgccgccc
ggtgaggtcgtcgcccgcacgatggacgccgaccggctggcgcgctacaccgaccgctgg
gtcgacttcgtcaacggcctgatcgtggccgccctcaccgccctcatcgcccagacctgg
gtcgccggggcggtcctgctgacggtgatggtcgtctccgcgctcgcctcgaccctcggc
cgccgggtggcgggccggtccgcggccgctgcgtccaccgcgcgggcgacgttcgggcag
tcactcgtgtcggccctcgagtcggtgcgcacggtcaagctcgccgccgcgactccccag
gtgcaccagcacctgcgcgacgtcgacggcggccgggtcgacgcggccgtccgcgagcac
cgcgtccaggcgctgctcgacggcgtgccgctcgtgatggtgcagtgcggcgtcgtcgcg
gcgtgggccggcctgctgaccggccggtgggagctcgcgaccgcgctgctcatcgccaac
gccgtcagcggcttcgactggttcggccgcgtggccggctccgtcgtgaccgaggcgccc
ggtgtgcgcgcctggatgaacgccaccagcgagctcgcgggcggcggcgacctcgtcgac
ctgccgcccggcgtcgacctcgtcgccgggaccggccccgcgcccgaccgggcaccgcgt
gagccgctgcactcgctcagcatccgtgacctcgacgcgatccacgacgacggcaccctc
ggcgtccagggcgtcgacctcgacgtggcggcgggcgagctcgtgctgctgctcggtcag
gtcggctcgggcaagtccagcctcctcggcgcgctggccgggctggtgaccagcacgggc
gagatccgctggaacggcgaggtcgtcaccgacccgcagatcacgctgcggcccggtcgc
gtggcacacgtcgcccaggtgccgcgcgtgctctcgggcaccttcaccggcaacgtcgcc
ctcgaccaccccgaccgcgcggtcgtgcccgccctggaggcggcccgcatgggccgcgac
gtggccgaggccggcggcccggacgccctcgtcggccaccgcggcgtccgcctctccgga
ggacaggtccagcggctcgcgctggcccgcgcgctcgcggccgaggccgacgtgctgctg
gccgacgacgtgtcgtcggcgctcgacgccagcacggagatcgagctgtggcacgcgctc
cgcgcccgcggcgctgcggtgatcggagccaccagcaagtccgccgcgctcgcccaggcc
gaccgggtggtcgtgctcgactccggtcgtgtggtcgacgacggcccgtggtccgagctc
tccgcgcgctgggcacacctggccggctga
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