Nocardioides renjunii: SHK17_08620
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Entry
SHK17_08620 CDS
T10238
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter subunit CydD
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
nrn Nocardioides renjunii
Pathway
nrn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHK17_08620 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrn02000
]
SHK17_08620 (cydD)
Transporters [BR:
nrn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SHK17_08620 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_21
AAA_16
RsgA_GTPase
AAA_29
Rad17
AAA_18
PRK
T2SSE
NPHP3_N
NACHT
AAA_28
AAA_23
nSTAND1
AAA_33
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WQQ24038
LinkDB
All DBs
Position
complement(1793618..1796974)
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AA seq
1118 aa
AA seq
DB search
MKPLDPAVLPHLRPARASLALVAACGVLGGLATVGQAFALGALVVAAVGAGDWHGPAWWL
GGLVLLRTATAYVGQRASARAAGEVSGALRCRLLDAARHVPDLSPARLAVLATRGVAGVE
PYVTRYLPALVPAAVLPVVTLAAITWLDPLSGLVVALTLPLVPVFAVLVGLTTRDRARTQ
WRALETLSGHFLDVVRGLPTLVAHRRADAQVATIRSVTHHHRRATVDTLKVAFASSSVLE
LVATLSVALVAVTVGLRLASGSVDFRVALTVLLLAPEAYWPLRRVGAEFHAAAEGTAALA
DADELLARSSVAPAPATRPASTAVVLHGLAVGHDAPLTGPLDLELPARGLVAVSGPSGCG
KSTLLATLRGELPARVGDVLVGGTPLGEVDPRWWRDQVAWAPQRPWLLADTVAANVRLGD
PNAGDAEVWEALDSVGLREVVRALPEGLATPLGEDGAGLSAGQRARVALARVVLAGRPVV
LLDEPSAHLDDETEQVLLDTVARLARTSLVVVVAHRPAVLAAADRVVRLEPAAAVVEAAE
RTAAAAPVADPRPSASRPAPVPVDDAAEDAARPRWGMATATALGALSTASGVALTATAGW
LITRASEQPPVLHLVVAIVGVRLFGLARPVLRHAERVLSHDVVLRELAERRARVYADLVP
LVPGRLGPRRGDLLTQVVDDVDALLDERLRVRQPVATAALVGAGAAVLAALLDPAAGLVV
LGVVAAGAAAYLLARHGAATAEPHVLARRADLATRVEEVAHGVRELEQWGATDGGLAEVR
DGSTALAEAGHRSSRAVAAATALTTLIAGLGVVAVAVLVDPGSVGPAVLALLLLLPLALA
DVTVALADAGALSVRAAAARRRLDRLAATAPAVTDPARPRPLTGAHDVEMDHVALGWADR
AVVSLDHLGLRPGEHLGVTGPSGCGKSTLAATLVRFVDPVAGQVSLAGTDLRELALDDVR
RTVGLVDDDPHVFASTVAENVRLARPGATDDEVRDALERACLGTWVDGLPAGIHTHVGAG
SREVSGGERARLALARALLADAPVLVLDEPTAHLDGATARAVAGEMLGAAAREGRSVVWI
THGTVGLEAMDRVVRLDADGGVDGVGLSRPLAASAAAG
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctcgacccggcggtccttccccacctgcgtcccgcccgggcgtccctcgcc
ctcgtcgccgcctgcggcgtcctcggcgggctcgccacggtcggccaggccttcgcgctc
ggggcgctggtcgtcgctgcggtcggtgccggcgactggcacggaccggcgtggtggctg
ggcggcctcgtgctcctgcgcacggctacggcgtacgtcggccagcgcgcgtccgcacgc
gccgccggcgaggtctccggtgctctccggtgccggctcctcgacgccgcccggcacgtc
ccggacctgtcccccgcgcgcctggcggtgctcgccacccgcggcgtggccggcgtggag
ccctacgtcacgcgctacctccccgcgctcgtccccgcggccgtcctcccggtggtcacg
ctcgcggccatcacctggctggacccgctgtccgggctcgtcgtggcgctgaccctgccg
ctcgtcccggtcttcgcggtgctcgtcggcctcaccacccgcgaccgggcccgcacgcag
tggcgcgcgctcgagacgctgtcgggccacttcctcgacgtcgtgcgcggcctgccgacg
ctggtcgcgcaccgtcgcgccgacgcgcaggtggccacgatccgctccgtcacccaccac
caccgccgcgccaccgtcgacaccctcaaggtggccttcgcctcctcctcggtgctggag
ctggtggccacgctgtcggtggccctcgtcgccgtcaccgtggggctgcggctcgcatcg
gggtcggtcgacttccgggtcgcgctcaccgtgctgctgctggcgccggaggcctactgg
ccgctgcgccgcgtgggcgccgagttccacgccgcggcggagggcacggcggccctcgcg
gacgccgacgagctgctggcccgctcgtcagtggccccggcccccgccacgaggcccgcg
tccaccgcggtggtgctgcacggcctcgccgtcgggcacgacgccccgctgaccggcccg
ctcgacctcgagctgcccgcccgcgggctcgtcgcggtctccgggccctcgggctgcggg
aagtcgaccctgctcgccaccctccgtggcgagctgccggcacgggtcggcgacgtcctc
gtcggcggcacgcccctcggcgaggtggacccgcggtggtggcgcgaccaggtggcgtgg
gcgccgcaacgaccgtggctgctggccgacaccgtcgcggccaacgtccgcctcggcgac
cccaatgcaggcgacgccgaggtctgggaggcgctcgacagcgtcgggctgcgcgaggtg
gtgcgtgcactgccggagggcctggcgaccccgctgggcgaggacggcgccgggctctcc
gcgggccagcgggcccgcgtcgcgctggcgcgggtggtgctggccgggcgaccggtcgtc
ctgctcgacgagccgagcgcccacctcgacgacgagaccgagcaggtgctgctcgacacc
gtcgcgcggctggcccggacgagcctcgtcgtggtcgtcgcgcaccggcccgccgtgctc
gccgccgccgaccgggtggtccggctcgagcccgcggccgctgtggtggaggcggcggag
cgaaccgccgcagccgcgcccgtcgccgacccccgcccgtccgcgtcgcgccccgcaccg
gtgcccgtcgacgacgccgcggaggatgccgcccgcccccgctggggcatggcgaccgcg
acagcgctcggtgcactgtccaccgcgtccggggtcgcactcaccgcgacggcgggctgg
ctcatcacccgtgccagcgagcagccgccggtgctgcacctggtcgtcgcgatcgtcggg
gtgcggctgttcggcctggcccggccggtcctgcggcacgccgagcgcgtgctgagccac
gacgtggtgctgcgcgagctggccgagcggcgcgcccgggtctacgccgacctcgtcccg
ctggtgccgggccggctcggcccgcgtcgcggcgacctgctcacccaggtcgtggacgac
gtcgacgcgctgctggacgagcggctgcgggtgcgccagccggtcgcgacggccgcgctc
gtcggcgcgggtgccgcggtgctggcggcactgctcgacccggccgccggcctcgtcgtg
ctcggggtggtggcggcgggcgccgccgcctacctgctcgcccggcacggcgcagccacc
gcggagccgcacgtcctggcccgtcgggccgacctggccacgagggtcgaggaggtggcc
cacggggtgagggagctcgagcagtggggagcgaccgacgggggcctcgcggaggtgcgg
gacgggtccaccgcgctcgccgaggccgggcaccgctcctcccgagccgtggcggccgcc
accgcgctcaccacgctcatcgcgggtctcggcgtcgtcgcggtcgccgtcctcgtcgac
cccggctcggtgggtcccgccgtcctggcgctcctgctgctcctgcccctggcgctggcg
gacgtcaccgtggctctcgccgacgcgggtgcgctgtcggtgcgggcagcagccgcccgc
cggcgcctcgaccggctcgccgccaccgcgcccgccgtcacggaccccgcccggccacga
ccgctgaccggtgcccacgacgtcgagatggaccacgtcgcgctgggctgggcggaccgc
gcggtcgtgtcgctggaccacctcggtctgcggccgggcgagcacctcggcgtcaccggc
cccagcgggtgcggcaagtccaccctggccgcgaccctggtccgcttcgtcgacccggtc
gcggggcaggtgtcgctcgccgggacggacctgcgggagctggcgctcgacgacgtacgc
cgcaccgtcggcctcgtcgacgacgacccgcacgtcttcgcgtccaccgtggcggagaac
gtgcgcctcgcccgtcccggcgccaccgacgacgaggtgcgcgacgcgctcgagcgggcg
tgcctcggcacgtgggtggacggcctcccggccggcatccacacgcacgtcggcgcgggc
tcgcgggaggtctcgggcggcgagcgggcacggctggcgctggcccgcgcgctgctggcg
gacgccccggtcctcgtcctggacgagccgacggcccacctcgacggcgccaccgcgcgg
gccgtggccggcgagatgctcggggccgccgcgcgcgagggccgctccgtcgtgtggatc
acccacggcaccgtcgggctggaggcgatggaccgcgtcgtccggctggacgccgacggg
ggtgtcgacggggtcgggctcagccggcctctcgcggcgagcgcagcggcagggtga
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