Nocardioides renjunii: SHK17_08885
Help
Entry
SHK17_08885 CDS
T10238
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00260
Glycine, serine and threonine metabolism
nrn00460
Cyanoamino acid metabolism
nrn00630
Glyoxylate and dicarboxylate metabolism
nrn00670
One carbon pool by folate
nrn00680
Methane metabolism
nrn01100
Metabolic pathways
nrn01110
Biosynthesis of secondary metabolites
nrn01120
Microbial metabolism in diverse environments
nrn01200
Carbon metabolism
nrn01230
Biosynthesis of amino acids
nrn01240
Biosynthesis of cofactors
nrn04981
Folate transport and metabolism
Module
nrn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SHK17_08885
09102 Energy metabolism
00680 Methane metabolism
SHK17_08885
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SHK17_08885
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SHK17_08885
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SHK17_08885
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SHK17_08885
Enzymes [BR:
nrn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SHK17_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WQQ24088
LinkDB
All DBs
Position
1858695..1860131
Genome browser
AA seq
478 aa
AA seq
DB search
MTDSLISSAYSQALEVIASVEPRIAEATRQELADQRGSLKLIASENYASPAVLLTMGTWF
SDKYAEGTVGHRFYAGCQNVDTVEALAAEHARELFGAPYAYVQPHSGIDANLVAFWSILA
NRVETPYLQKLQTKNVNELTEADWETLRHEFGNQRLLGMSLDAGGHLTHGFRPNISGKMF
HQQQYGTDPGTGLLDYDAVAAKAREFKPLVLVAGYSAYPRRVNFARMREIADEVGAVLMV
DMAHFAGLVAGKVFTGEENPVPYAHITTTTTHKSLRGPRGGMVLAQEEFAADVDRGCPMV
LGGPLSHVMAAKAVAFAEARTTEFQGYAQKVADNAKSLAEGFLSRGANLVTGGTDNHLVL
LDVSSFGLTGRQAESALLDAGVVTNRNSVPADANGAWYTSGVRLGTPALTTRGFGHDEFD
TVADLIVDVLSNTEAGTTKAGGPSKASYVLGDGVADRVTKRSAEMLDKHPLYPGLVLS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacggactccctgatcagcagcgcgtactcccaggccctcgaggtcatcgcctcggtg
gagccgcggatcgccgaggccacccgccaggagctcgcggaccagcgcggatcgctcaag
ctgatcgcgtcggagaactacgcgtcgccggccgtgctgctcaccatgggcacctggttc
agcgacaagtacgccgagggcaccgtcgggcaccggttctacgccggttgccagaacgtc
gacacggtggaggcgctcgccgccgagcacgcccgcgagctgttcggcgcgccgtatgcc
tacgtccagccgcactcgggcatcgacgccaacctcgtcgccttctggtcgatcctggcc
aaccgggtcgagaccccctacctgcagaagctgcagaccaagaacgtcaacgagctcacc
gaggccgactgggagacgctgcgccacgagttcggcaaccagcgcctgctcggcatgtcc
ctggacgccgggggccacctcacccacggcttccgcccgaacatcagcggcaagatgttc
caccagcagcagtacggcaccgaccccgggacggggctcctcgactacgacgccgtcgcc
gccaaggcccgcgagttcaagccgctcgtgctggtcgccggctactccgcctacccccgc
cgggtgaacttcgccaggatgcgcgagatcgccgacgaggtcggcgcggtgctgatggtc
gacatggcgcacttcgccggcctggtggcaggcaaggtgttcaccggtgaggagaacccg
gtgccctacgcccacatcaccaccacgacgacccacaagtcgctgcgcgggccgcgcggc
ggcatggtgctggcgcaggaggagttcgccgccgacgtcgaccgcggctgcccgatggtg
ctcggcggcccgctctcgcacgtgatggccgccaaggccgtcgccttcgccgaggcccgc
accaccgagttccagggctacgcgcagaaggtcgccgacaacgccaagtcgctcgccgag
ggcttcctcagccgcggcgcgaacctggtcaccggcggcaccgacaaccacctcgtcctg
ctcgacgtgtcgtcgttcgggctgaccggccgccaggccgagtccgcgctgctcgacgcc
ggggtggtcaccaaccgcaactcggtcccggccgacgccaacggcgcctggtacacctcc
ggcgtccgcctcggcactcccgcgctcaccacccgcggcttcggccacgacgagttcgac
acggtcgccgacctgatcgtcgacgtgctgagcaacaccgaggccggcacgaccaaggcc
ggcggcccgagcaaggcgtcgtacgtcctgggcgacggcgtggccgaccgcgtcacgaag
cggtcggcggagatgctcgacaagcacccgctctatccagggctcgtcctcagctga
DBGET
integrated database retrieval system
