Nocardioides renjunii: SHK17_09135
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Entry
SHK17_09135 CDS
T10238
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nrn Nocardioides renjunii
Pathway
nrn03030
DNA replication
nrn03410
Base excision repair
nrn03420
Nucleotide excision repair
nrn03440
Homologous recombination
Brite
Enzymes [BR:
nrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHK17_09135 (polA)
DNA replication proteins [BR:
nrn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SHK17_09135 (polA)
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SHK17_09135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHK17_09135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQQ24424
LinkDB
All DBs
Position
1905889..1908594
Genome browser
AA seq
901 aa
AA seq
DB search
MSAASTEQTRPRLLLLDGHSLAYRAFFALPVENFATASGQHTNAVYGFTSMLVNVLRDEV
PTHVAVAFDKSRQTFRLEEYSDYKAKRNKTPDEFGSQLPLIRRVLDALRIQHLSMDGYEA
DDIIATLATQGLAEGMQVLIMTGDRDSIQLVTDDSTVLYTMRGVSDLARLTPAAVQEKYG
VPPHRYPELAAIVGETSDNLPGVPGVGQGYAAKWINQFDGLDNVIARADEITGKKGEALR
EHLGDVIRNRRLNALVRDLTLPVRPDQLVRQPWDRTEGLELLDELEFRGELRSRLLDTID
PDPGETFEAESGFELDGRRLGAGEAAAWLDTHAPAEVRVGVSVQGSWRAGTGEVVSVAVA
TGDGQAAWIDVSDIGPDDDAAVAAWLADPSRPKALHDANGPSLALAARGWELGGLQVDTA
LAAYLVQPDQRSYALADLTLRYLKRELRQDAVDTEQLSFDAMDDTTASDTAMLTARAVLD
LADALDGAVEEHGGTRLLQEVELPLIGTLVRMEQVGIAVDSDHLEGLESEFGDQVRAAAN
DAYDVIGKEINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALQQLFEKTEHPFLQHL
LRHRDVIRLRQTVEGLLKTVASDGRIHTTYNQIIAATGRLSSTDPNLQNIPIRTEAGRRI
REGFVVGEGYESLMTADYSQVEMRIMAHLSEDALLIEAFRSGQDFHSITAARVFGVDAAD
VSVEQRAKIKAMNYGLAYGLSAFGLSQQLRIDTSEARGLMDEYFQTFGGVRDYLGGIVDE
ARRSGFTETILGRRRYLPDLTSDNRQRRETAERMALNAPIQGSAADLVKVAMLGVERALA
EQGLRSRMLLQVHDELVFEVAPGEADALAELVRVEMGGAADLAVPLDVSIGTGRSWHDAA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgcgtcgaccgagcagacacgcccgcgactcctgctgctggacggccactcg
ctggcctaccgcgcgttcttcgccctgccggtggagaacttcgcgaccgcgtccggacag
cacaccaacgcggtctacggcttcacctcgatgctggtcaacgtgctccgcgacgaggtg
ccgacgcacgtcgcggtcgccttcgacaagtcgcgccagaccttccgcctggaggagtac
agcgactacaaggccaagcgcaacaagacccccgacgagttcggcagccagctgcccctc
atccggcgggtgctcgacgcgctgcggatccagcacctctcgatggacggctacgaggcc
gacgacatcatcgcgacgctcgctacgcagggcctggccgaggggatgcaggtcctgatc
atgaccggcgaccgcgactccatccagctcgtcaccgacgactccacggtcctctacacg
atgcggggcgtgagcgacctggctcggctgacgccggcggccgtccaggagaagtacggc
gtcccgccgcaccgctatcccgagctcgcggcgatcgtcggcgagacctccgacaacctc
cccggcgtgccgggcgtcggccagggctacgccgcgaagtggatcaaccagttcgacggc
ctcgacaacgtgatcgcccgcgccgacgagatcaccggcaagaagggcgaggcgctgcgc
gagcacctcggcgacgtcatccgcaaccgccgcctcaacgcgctggtccgcgacctgacg
ctgccggtgcgccccgaccagctggtgcgccagccgtgggaccgcaccgagggtctcgag
ctgctcgacgagctggagttccgcggagagctccgctcccggctgctcgacaccatcgac
cccgacccgggcgagaccttcgaggccgagtcgggcttcgagctcgacggccgccggctc
ggcgccggcgaggccgccgcctggctcgacacccacgcccccgccgaggtgcgggtcggt
gtctcggtgcagggcagctggcgggccggcaccggcgaggtcgtctccgtcgcggtggcg
accggcgacggccaggcggcgtggatcgacgtctccgatatcggccccgacgacgacgcg
gcggtggccgcgtggctcgccgacccgtcgcggcccaaggccctccacgacgccaacggc
ccgagcctggcgctggccgcccggggctgggagctcggcggcctgcaggtcgacaccgcg
ctcgcggcctacctggtccagcccgaccagcggtcctacgccctcgccgacctcacgctg
cgctacctcaagcgcgagctgcggcaggacgcggtcgacaccgagcagctgagcttcgac
gcgatggacgacaccacggcgagcgacaccgccatgctgaccgcccgcgcggtcctcgac
ctcgccgacgccctcgacggcgccgtcgaggagcacggcggcacccgcctgctgcaggag
gtggagctgccgctgatcgggacgctcgtgcggatggagcaggtcggcatcgcggtcgac
tccgaccacctcgagggcctggagtccgagttcggcgaccaggtccgcgctgcggccaac
gacgcctacgacgtcatcggcaaggagatcaacctcggctcgcccaagcagttgcaggtg
gtgctgttcgacgagctcgacatgcccaagaccaagcgcaccaagaccggctacaccacc
gacgccgacgcgctgcagcagctgttcgagaagaccgagcaccccttcctccaacacctg
ctgcgccaccgcgacgtgatccggctgcgccagacggtggaggggctgctcaagaccgtc
gcctccgacggtcgcatccacacgacctacaaccagatcatcgcggcgaccggccggctc
tcgagcaccgaccccaacctgcagaacatccccatccgcaccgaggccgggcgccgcatc
cgcgagggcttcgtcgtcggcgagggctacgagtcgctgatgaccgccgactacagccag
gtcgagatgcggatcatggcccacctgtccgaggacgcgctgctcatcgaggcgttccgc
tccggccaggacttccactccatcaccgctgcacgggtgttcggggtcgacgccgcagac
gtgagtgtcgagcagcgcgccaagatcaaggcgatgaactacggcctcgcctacggcctg
tcggcgttcgggctgtcccagcagctgcgcatcgacacctccgaggcgcggggcctgatg
gacgagtacttccagaccttcggcggggtccgtgactacctcggcggcatcgtcgacgag
gcgcggcgctccggcttcaccgagacgatcctgggtcgtcgccgctacctccccgacctc
acgagcgacaaccggcagcgacgagagaccgcggagcggatggcgctcaacgcgcccatc
cagggctcggccgccgacctggtcaaggtcgccatgctgggcgtcgagcgggcgctcgcc
gagcaggggttgcgctcccggatgctgctccaggtccacgacgagctcgtcttcgaggtg
gcgcccggcgaggccgacgcgctggccgagctggtgcgggtcgagatgggcggagccgcc
gacctggcggtgccgctcgacgtgtccatcggcaccggccgcagctggcacgacgcggcg
cactag
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