Nocardioides renjunii: SHK17_09240
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Entry
SHK17_09240 CDS
T10238
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
nrn Nocardioides renjunii
Pathway
nrn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SHK17_09240 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nrn03011
]
SHK17_09240 (rpsA)
Ribosome [BR:
nrn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SHK17_09240 (rpsA)
Bacteria
SHK17_09240 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
SOGA1-2-like_CC
DUF2110
Motif
Other DBs
NCBI-ProteinID:
WQQ24153
LinkDB
All DBs
Position
1937744..1939225
Genome browser
AA seq
493 aa
AA seq
DB search
MTSTLSTLPDYDAPQVAVNDIGSEEDFLAAIDETIKYFNDGDIVEGTIVKVDRDEVLLDI
GYKTEGVIPSRELSIKHDVDPNEVVTVGDKVEALVLQKEDKEGRLILSKKRAQYERAWGT
IEQVKEEDGVVEGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGQTLEAKIIE
LDKNRNNVVLSRRAWLEQTQSEVRHGFLTQLQKGQIRKGVVSSIVNFGAFVDLGGVDGLV
HVSELSWKHIDHPSEVVAVGDEVTVEVLDVDMDRERVSLSLKATQEDPWQHFARTHQIGQ
IVPGKVTKLVPFGSFVRVEEGIEGLVHISELAERHVEIPEQVVQVNDDVMVKIIDIDLER
RRISLSLKQANETSAAADVEEFDPTLYGMTATYDEQGNYVYPEGFDPETGEWLEGFDEQR
ATWEEQYAKAHARWEAHVKQQEEAKQAEVEAGEATSYSSGGDTEVETGGDTGGSLASDEA
LQALREKLTGGQA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcacgctctccactcttccggactacgacgccccgcaggtggctgtcaacgac
atcgggtccgaagaggacttcctcgccgctatcgacgagaccatcaagtacttcaacgac
ggtgacatcgtcgaggggaccatcgtcaaggtggaccgcgacgaggtcctcctcgacatc
ggctacaagaccgagggcgtcatcccgtcccgcgagctgtcgatcaagcacgacgtcgac
cccaacgaggtcgtcaccgtcggtgacaaggtcgaggccctcgtcctccagaaggaggac
aaggaaggccgcctgatcctgtccaagaagcgtgctcagtacgagcgtgcctggggcacc
atcgagcaggtcaaggaggaggacggcgtcgtcgagggcaccgtcatcgaggtcgtcaag
ggcggcctcatcctcgacatcggcctccgcggcttcctgcccgcgtccctcgtggagatg
cgtcgcgtccgcgacctgcagccctacgtcggccagacgctcgaggccaagatcatcgag
ctcgacaagaaccgcaacaacgtggtcctgtcgcgccgtgcctggctcgagcagacccag
tccgaggtccgccacggcttcctcacccagctccagaagggccagatccgcaagggtgtc
gtgtcctcgatcgtcaacttcggtgccttcgtggacctcggtggcgtcgacggcctggtc
cacgtctccgagctgtcgtggaagcacatcgaccacccgtccgaggtcgtcgccgtcggc
gacgaggtcaccgtcgaggtcctcgacgtggacatggaccgcgagcgtgtctccctgtcg
ctgaaggcgacgcaggaggacccgtggcagcacttcgcccgcacccaccagatcggccag
atcgtgccgggcaaggtcaccaagctggtgcccttcggctcgttcgtccgtgtcgaggag
ggcatcgagggcctggtgcacatctccgagctggccgagcgccacgtggagatcccggag
caggtcgtccaggtcaacgacgacgtcatggtcaagatcatcgacatcgacctcgagcgt
cgccggatctcgctgtccctcaagcaggccaacgagacgtccgccgccgccgacgtggag
gagttcgacccgaccctctacggcatgaccgcgacctacgacgagcagggcaactacgtc
taccccgagggcttcgaccccgagacgggcgagtggctcgagggcttcgacgagcagcgc
gcgacctgggaggagcagtacgccaaggcgcacgctcgctgggaggcgcacgtcaagcag
caggaggaggccaagcaggccgaggtcgaggccggcgaggccacgtcctactcctcgggt
ggcgacaccgaggtcgagaccggtggcgacaccggcggctcgctggcgtccgacgaggcg
ctgcaggcgctccgcgagaagctcaccggcggccaggcctga
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