Nocardioides renjunii: SHK17_09600
Help
Entry
SHK17_09600 CDS
T10238
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00730
Thiamine metabolism
nrn00900
Terpenoid backbone biosynthesis
nrn01100
Metabolic pathways
nrn01110
Biosynthesis of secondary metabolites
Module
nrn_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SHK17_09600 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SHK17_09600 (dxs)
Enzymes [BR:
nrn01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
SHK17_09600 (dxs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
PFOR_II
Transketolase_C_1
Motif
Other DBs
NCBI-ProteinID:
WQQ24223
LinkDB
All DBs
Position
2010929..2012833
Genome browser
AA seq
634 aa
AA seq
DB search
MALLDSIASPRDLRDLSAEQLDELAAEIRDLMIRTVATNSGHLGPNLGVVELTLAIHRVF
DSPHDRVVFDTGHQSYVHKLVTGRHVGFGTLRKEGGVSGYPSQAESEHDIVENSHASTSL
SYADGLAKAYAIKGEDRHVVAVIGDGALTGGMAWEALNNIAIAQNSRLVIVVNDNERSYT
PTIGGLATALTSLRTNPRYEQVLDLVKKRLNAVPGVGHAAYDALHAVKKGMKDALAPQGL
FEDLGLKYVGPVDGHDRAAMEQALTHAKKFNGPVIVHAITRKGQGYDPALRHEADQFHAP
GPFDVQTGAEKPKGKIWTDHFSEAIVELGARREDVVAITAAMMHPVGLDVFAATYPERTF
DVGIAEQHAVTSAAGLAMGGLHPVFAVYATFLNRAFDQVLMDVALHKCGVTFVLDRSGVT
GDDGASHNGMWDMSMLQVVPGLRLAAPRDVTRLHELLDEAVQVDDAPTVVRFPKGPPPAD
IPALDRVGGVDVLVREGEQDVLVVAVGSMGTTAVEVASRLTAQGIGVTVVDPRWVKPVDP
AVIDLAREHRLVVSIEDNGRVGGCGAVLLQTLNDEGVHTPFRLHGIPQEFLDHAKRDAIL
TRIGLDAQTIARAIVEDVTALDEGVTLVEVDHPA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcactcctcgactcgatcgcgtcaccgcgcgacctccgcgacctctcggcggagcag
ctggacgagctggccgcggagatccgcgacctgatgatccgcacggtggcgaccaactcc
ggtcacctcgggcccaacctgggcgtcgtggagctgacgctggccatccaccgggtcttc
gactccccgcacgaccgtgtcgtcttcgacaccgggcaccagtcctacgtccacaagctc
gtcaccgggcgccacgtcggcttcggaaccctgcgcaaggagggcggcgtcagcggctac
cccagccaggccgagtccgagcacgacatcgtcgagaactcccacgcctccacctcgctg
tcctacgccgacgggctcgccaaggcctacgccatcaagggcgaggaccggcacgtcgtg
gccgtcatcggtgacggtgcgctcaccggcggcatggcctgggaggcgctcaacaacatc
gccatcgcgcagaacagccgcctggtgatcgtggtcaacgacaacgagcggtcctacacc
ccgacgatcggcgggctcgcgaccgcgctgacctcgctgcgcaccaacccccgctacgag
caggtcctcgacctggtcaagaagcggctcaacgccgtgcccggcgtcggccacgcggcc
tacgacgcgctgcacgcggtgaagaagggcatgaaggacgccctggcgccccagggcctg
ttcgaggacctgggcctcaagtacgtcggtccggtcgacggccacgaccgcgccgccatg
gagcaggcgctcacccacgccaagaagttcaacggccccgtgatcgtgcacgcgatcacc
cgcaagggccagggctacgacccggcgctgcggcacgaggccgaccagttccacgccccc
ggccccttcgacgtccagacgggcgcggagaagcccaagggcaagatctggaccgaccac
ttctccgaggccatcgtcgagctgggcgcccgccgcgaggacgtcgtggccatcaccgcc
gcgatgatgcacccggtcgggctcgacgtcttcgccgcgacctaccccgagcgcaccttc
gacgtcggcatcgccgagcagcacgccgtcacgtcggccgccggcctggcgatgggtggg
ctgcacccggtgttcgcggtctacgcgaccttcctcaaccgggccttcgaccaggtcctc
atggacgtcgcgctgcacaagtgcggcgtcaccttcgtgctcgaccgctccggcgtcacc
ggtgacgacggcgccagccacaacggcatgtgggacatgtcgatgctccaggtggtcccg
ggcctgcgcctcgccgccccgcgcgacgtcacgcgcctgcacgagctcctcgacgaagcc
gtgcaggtcgacgacgccccgacggtggtccggttccccaagggcccgccgcccgccgac
atccccgccctcgaccgtgtcggcggtgtcgacgtgctcgtccgcgagggcgagcaggac
gtgctcgtcgtggcggtcggatccatgggcaccaccgcggtcgaggtcgcctcccgtctc
accgcccagggcatcggcgtgaccgtcgtcgacccgcggtgggtcaagccggtcgacccg
gccgtcatcgacctggcccgcgagcaccggctcgtcgtgagcatcgaggacaacgggcgc
gtcggcggctgcggtgccgtgctcctgcagaccctcaacgacgagggcgtgcacacgccg
ttccggctgcacgggatcccgcaggagttcctcgaccacgccaagcgcgacgcgatcctc
acccgcatcggcctggacgcgcagaccatcgcccgcgccatcgtcgaggacgtcaccgcg
ctcgacgagggtgtcacgctggtcgaggtcgaccaccccgcctga
DBGET
integrated database retrieval system
