Nocardioides renjunii: SHK17_10120
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Entry
SHK17_10120 CDS
T10238
Name
(GenBank) MFS transporter
KO
K06902
MFS transporter, UMF1 family
Organism
nrn Nocardioides renjunii
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nrn04131
]
SHK17_10120
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nrn02000
]
SHK17_10120
Membrane trafficking [BR:
nrn04131
]
Autophagy
Other autophagy associated proteins
Others
SHK17_10120
Transporters [BR:
nrn02000
]
Major facilitator superfamily (MFS)
Unknown transporters
Unknown major facilitator-1 (UMF1) [TC:
2.A.1.24
]
SHK17_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG22
MFS_1
MFS_2
Motif
Other DBs
NCBI-ProteinID:
WQQ24327
LinkDB
All DBs
Position
complement(2125571..2126926)
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AA seq
451 aa
AA seq
DB search
MSDVDGGIADLRPLVRAQEQKAWYFYDWANSAFATTIAGVLFGPYLIAIAEEAAVDDRVS
VLGIAVAPGALPAYVITFSTLISALVLPLLGAVADRTARKKDMLAGFAWTGSFFAALLFF
MTGDNWQLGAITFVLANLCFGASAVFNDAILPLISDESERDRVSTRGWAYGYAGGGLLLA
LNFVLVSFHDTFGLTEGMAVRISLLSAAVWWAAFTFIPWRGLQNHPPVHVEQVEGGVLQR
SFGQLLQTLKDMRNYPVALTFLLAYLFFNDGIQTVISQASVYGVEELGFPQGTMLGVYLL
VQFVAVGGALLFGRIAAVRGAKSTILGGLVVWMLIVTAALFIPEESLLPLLALGVAIGIV
LGGTQALARSYFSLLIPRGKEAEYFSFYHAMERGTSWFGTLVFGLVYTFTDSYRPAIFAL
IIFFVVGGLLLMRVDTARGIRDAGNDVPAVI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgtcgacggtggcatcgccgacctgaggccgctggtgcgggcccaggagcag
aaggcctggtacttctacgactgggccaacagcgccttcgccaccacgatcgccggcgtc
ctcttcgggccctacctcatcgccatcgccgaggaggccgcggtcgacgatcgggtctcg
gtgctgggcatcgccgtggcgcccggcgccctcccggcctacgtcatcaccttctccacg
ctgatctcggcgctcgtgctgccgctgctcggcgccgtcgcggaccggacggcgcgcaag
aaggacatgctcgccggcttcgcctggaccgggtcgttcttcgcggcgctgctgttcttc
atgaccggcgacaactggcagctcggcgccatcacgttcgtcctggccaacctgtgcttc
ggcgcgtcggcggtgttcaacgacgccatcctcccgctgatctccgacgagtccgagcgc
gaccgggtctcgacgcggggctgggcctacggctacgccggcggaggcctgctgctggcg
ctcaacttcgtgctggtcagcttccacgacaccttcgggctcaccgagggcatggcggtg
cgcatctcgctgctctccgccgccgtgtggtgggcggccttcacgttcatcccctggcgc
gggctccagaaccacccgccggtgcacgtcgagcaggtcgagggcggcgtgctgcagcgc
agcttcggccagctgctgcagaccctcaaggacatgcgcaactaccccgtcgcgctcacg
ttcctgctggcctacctgttcttcaacgacggcatccagaccgtcatcagccaggcctcc
gtctacggcgtggaggagctcggcttcccgcagggcacgatgctcggcgtctacctgctc
gtgcagttcgtggcggtcggcggcgcgctgctcttcggccggatcgccgccgtgcgcggc
gcgaagtcgaccatcctcggcggcctggtcgtgtggatgctcatcgtgacggcggcactg
ttcatccccgaggagtccctcctgccgctgctcgccctcggcgtcgccatcggcatcgtc
ctcggcggcacgcaggcactcgcccggtcctacttctcgctgctgatcccccgcggcaag
gaggccgagtacttcagcttctaccacgcgatggagcggggcacgtcgtggttcgggacg
ctcgtgttcggcctcgtctacaccttcaccgactcctaccgaccggcgatcttcgcgctg
atcatcttcttcgtcgtcggcggtctcttgctgatgcgcgtggacaccgcccgcggcatc
cgcgacgccggcaacgacgtccccgccgtcatctga
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