Nocardioides renjunii: SHK17_12620
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Entry
SHK17_12620 CDS
T10238
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00750
Vitamin B6 metabolism
nrn01100
Metabolic pathways
nrn01240
Biosynthesis of cofactors
Module
nrn_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
SHK17_12620 (pdxS)
Enzymes [BR:
nrn01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
SHK17_12620 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
NMO
IGPS
OMPdecase
Glu_synthase
DHO_dh
TMP-TENI
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WQQ20746
LinkDB
All DBs
Position
complement(2654893..2655813)
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AA seq
306 aa
AA seq
DB search
MAEQTPQTSPETPIEHGTSRVKRGMAEMLKGGVIMDVVTAEQARIAEDAGAVAVMALERV
PADIRAQGGVSRMSDPDMIDSIIEAVSIPVMAKARIGHFAEAQVLQSLGVDYVDESEVLT
PADYANHIDKWQFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNAVMHMRTIG
GELRRLHGMAEDELYVAAKELQAPYELVKEVAAAGKLPVVLFTAGGIATPADAAMMMQLG
AEGVFVGSGIFKSGNPAERAEAIVKATTFHDDPDVVAKVSRGLGEAMVGINVDEIPQPHR
LAERGW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagaccccccagacgtcgcccgagacccccatcgagcacggcaccagccgc
gtcaagcgcggcatggccgagatgctcaagggcggcgtgatcatggacgtcgtgaccgcc
gagcaggcgaggatcgccgaggacgccggcgccgtcgcggtgatggcgctcgagcgcgtg
ccggccgacatccgcgcccagggcggcgtgtcgcggatgagcgaccccgacatgatcgac
tcgatcatcgaggcggtctcgatcccggtcatggccaaggcccgcatcggccacttcgcc
gaggcccaggtgctgcagtccctcggcgtcgactacgtcgacgagtccgaggtgctgacc
ccggccgactacgccaaccacatcgacaagtggcagttcaccgtgcccttcgtgtgcggt
gccaccaacctcggcgaggcactccgccgcatcaccgagggcgcggcgatgatccgctcc
aagggcgaggccggcaccggcgacgtctccaacgccgtcatgcacatgcgcacgatcggc
ggcgagctgcgccgcctgcacggcatggccgaggacgagctctacgtcgccgccaaggag
ctgcaggccccctacgagctggtcaaggaggtcgcggccgcgggcaagctcccggtcgtg
ctcttcaccgccggcggcatcgccacccccgccgacgccgcgatgatgatgcagctcggc
gccgagggcgtcttcgtcggctcgggcatcttcaagtccggcaacccggccgagcgcgcc
gaggccatcgtcaaggccacgaccttccacgacgaccccgacgtggtcgccaaggtctcg
cgcggcctgggcgaggcgatggtcggcatcaacgtcgacgagatcccgcagccgcaccgc
ctggccgagcgcggctggtga
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