Nocardioides renjunii: SHK17_13070
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Entry
SHK17_13070 CDS
T10238
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00470
D-Amino acid metabolism
nrn00550
Peptidoglycan biosynthesis
nrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHK17_13070 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHK17_13070 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
SHK17_13070 (murD)
Enzymes [BR:
nrn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SHK17_13070 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
Precursor biosynthesis
Amino acid ligase
SHK17_13070 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WQQ20834
LinkDB
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Position
complement(2738543..2740066)
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AA seq
507 aa
AA seq
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MADGPAPDVESLGRGSDWSGVRVVVAGFGVSGYAAADNLLFLGARVTALDEATSEAKAEK
AELLETLGATVRLGPGETAVLPDDVDLVVTSPGWRPTAPLLAQAAERGIPVWGEVELAWR
LRDPATAAPWLAVTGTNGKTTTVQMLRSILGAAGLRAAAVGNVGMPIVEAVMDPEPYDVL
AVELSSFQLHYTWSMSAESAVVLNVAEDHLDWYDDEPGGPTGMEQYAADKARIYERVQRA
CVYNLADPATEEMVREADVVEGARAVGFTLGTPSSGDVGIVEDLLVDRAFIEERATSAAE
LCTLADLASSAPHYVANALAAAALARAHGVSQQAVRDGLRDFRPDGHRIAHVAAADGVDW
VDDSKATNPHAAQSSLSAYDSVVWVAGGLAKGARFDDLVVAVRDRLRGVVLLGRDRQVVA
DALSRHAPDVPVIDVGADETGDPMERVVDAAAGLARSGDTVLLAPGCASMDMFTDYGARG
DAFAAAVHRRIARGGPAPDQTPDQTPD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacgggcccgccccggacgtggagtcgctcggccgcggcagcgactggtccggc
gtacgcgtcgtggtcgccggcttcggtgtctccggctacgccgccgccgacaacctgctg
ttcctcggcgcccgggtgacggcgctcgacgaggcgaccagcgaggcgaaggccgagaag
gccgagctcctcgagaccctcggcgccaccgtccgcctcggacccggcgagaccgcggtc
ctccccgacgacgtcgacctcgtcgtcacctcgcccggctggcgtccgaccgccccgctg
ctcgcgcaggcggccgagcgggggatcccggtgtggggcgaggtggagctggcctggcgg
ctgcgcgaccctgccaccgccgcgccgtggctggccgtcacgggcaccaacggcaagacg
acgacggtgcagatgctccgctcgatcctgggcgccgccgggctgcgcgccgccgccgtc
ggcaacgtcggcatgccgatcgtcgaggccgtgatggaccccgagccctacgacgtcctg
gccgtcgagctctccagcttccagctccactacacctggtcgatgtcggcggagtccgcc
gtcgtcctcaacgtcgccgaggaccacctcgactggtacgacgacgagcccgggggaccg
acgggcatggagcagtacgccgccgacaaggcgcggatctacgagcgggtgcagcgcgcc
tgcgtctacaacctcgccgaccccgcgaccgaggagatggtgcgcgaggccgacgtggtc
gagggtgcccgcgcggtcgggttcacgctcgggacgccgtcgtcgggcgacgtggggatc
gtggaggacctgctggtggaccgcgcgttcatcgaggagcgcgccaccagtgcggcggag
ctgtgcacgctcgccgacctcgcctcgtcggcaccgcactacgtcgccaacgcgctcgcg
gccgctgccctcgcccgggcccacggcgtgagccagcaggcggtccgcgacggactgcgc
gacttccggcccgacgggcaccggatcgcgcacgtcgcagcggccgacggcgtcgactgg
gtcgacgactccaaggcgaccaacccgcacgccgcccagtcctcgctcagcgcctacgac
tccgtggtctgggtggcgggcgggctcgccaagggcgcccgcttcgacgacctggtggtc
gcggtgcgcgaccggttgcggggcgtggtgctgctcggccgggaccggcaggtggtcgcc
gacgctctttcgcgacacgcgcccgatgtgccggtcatcgatgtgggtgccgacgagact
ggggatccgatggagcgcgtggtcgacgccgccgccgggctcgccaggtccggggacacc
gtgttgctggcgccggggtgcgcgtccatggacatgttcaccgactacggcgcgcgcggc
gacgcgttcgccgcggcggtgcaccgcaggatcgcccgcggcggtcccgcgcccgaccag
acgcccgaccagacgcccgactag
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