KEGG   Nocardioides renjunii: SHK17_13355
Entry
SHK17_13355       CDS       T10238                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
nrn  Nocardioides renjunii
Pathway
nrn00061  Fatty acid biosynthesis
nrn00071  Fatty acid degradation
nrn01100  Metabolic pathways
nrn01212  Fatty acid metabolism
nrn02024  Quorum sensing
nrn04146  Peroxisome
Module
nrn_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:nrn00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SHK17_13355
   00071 Fatty acid degradation
    SHK17_13355
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    SHK17_13355
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SHK17_13355
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:nrn01004]
    SHK17_13355
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nrn04147]
    SHK17_13355
Enzymes [BR:nrn01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SHK17_13355
Lipid biosynthesis proteins [BR:nrn01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   SHK17_13355
Exosome [BR:nrn04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SHK17_13355
  Exosomal proteins of breast cancer cells
   SHK17_13355
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: WQQ20889
LinkDB
Position
2798134..2799930
AA seq 598 aa
MREFTTPLSVAVPTTGNLTDDVVANAREAASTAVFSRPSDDGWVDVTAAEFHDEVRSVAK
GLVAAGVGAGDRVALLSKTRYEWTLLDYAIWFAGAVTVPIYETSSAEQIGWILQDSGARA
VVAEGPDHLARVREARQSADLVELQHVWSLQDNAVDVLGRLGSDISDELLEQRRTTATPH
DLATLIYTSGTTGKPKGCMLTHGNFMFELGVAVDELPELFEGDEASTLLFLPLAHVFARI
IQVGCVKSRARMGHSADIKNLVADLQGFRPTFILAVPRVFEKVFNTASQRATADGRGKIF
DRAADTAIAYSRALDGKRVPLRLRARHALFDRLVYGKLRQALGGSCAYAVSGGAPLGDRL
GHFYRGIGLSVLEGYGLTETTAALTVNLPDAQKVGTVGRPLPGTSVRVGDDGELLFKGGQ
VFAGYWGDEAATAEAVDRDGWFHTGDVGEVDDEGFVRITGRKKEILVTAGGKNVAPAVLE
DRLRAHALVDQCLVVGDGQPFIGALVTIDRETFPGWAEQHGKSGDLAGMLHDPDLVAAVQ
DAVDDANKAVSQAESIRKFTILPGEWTEEGGQLTPSLKLKRNVVVREARAEIEALYLG
NT seq 1797 nt   +upstreamnt  +downstreamnt
gtgcgtgagttcaccacgccgctctccgttgccgtccccaccacgggcaacctcaccgac
gacgtcgtggccaacgcccgcgaggcagcgtccaccgcggtgttcagccgcccgtcggac
gacggctgggtcgacgtcacggccgccgagttccacgacgaggtccgctccgtcgcgaag
ggcctcgtcgccgcgggcgtcggggcgggcgaccgggtcgccctgctgtccaagacccgc
tacgagtggacgctgctcgactacgccatctggttcgccggcgccgtcaccgtgccgatc
tacgagacgtcctcggccgagcagatcggctggatcctccaggactcgggtgcgcgcgcg
gtcgtcgccgagggccccgaccacctcgcgcgggtgcgcgaggcccggcagtcggccgac
ctcgtggagctccagcacgtctggtcgctgcaggacaacgccgtcgacgtgctcggccgc
ctcggctccgacatctccgacgagctgctcgagcagcggcgcaccaccgccaccccgcac
gacctggccacgctcatctacaccagcggcaccaccggcaagcccaagggctgcatgctg
acccacggcaacttcatgttcgagctcggcgtcgccgtcgacgagctccctgagctgttc
gagggcgacgaggcctcgacgctcctcttcctgccgctggcacacgtcttcgcccgcatc
atccaggtcggctgcgtgaagagccgcgcccggatggggcacagcgccgacatcaagaac
ctcgtcgccgacctgcagggattcaggccgacgttcatcctcgccgtgccccgggtcttc
gagaaggtcttcaacaccgcctcgcagcgcgcgacggccgacggccgcggcaagatcttc
gaccgcgccgccgacaccgcgatcgcgtactcccgtgccctcgacggcaagcgggtcccg
ctacgcctgcgcgcccggcacgccctcttcgaccggctcgtctacggcaagctgcgccag
gcgctcggcggcagctgtgcgtacgccgtctccggtggcgcgccgctgggcgaccggctc
ggccacttctaccgcggcatcggcctgtccgtgctcgagggctacggcctgaccgagacc
acggccgcgctgaccgtcaacctccccgacgcgcagaaggtgggcaccgtgggtcgcccc
ctgcccggcacgagcgtccgcgtgggcgatgacggcgagctgctgttcaagggcggccag
gtcttcgccggctactggggcgacgaggccgccaccgccgaggccgtcgaccgcgacggc
tggttccacaccggcgacgtcggcgaggtcgacgacgagggcttcgtccgcatcaccggg
cgcaagaaggagatcctggtgaccgccggcggcaagaacgtcgccccggccgtgctcgag
gaccgcctgcgcgcccacgccctggtcgaccagtgcctcgtcgtcggggacgggcagccg
ttcatcggcgcgctggtgaccatcgaccgcgagacgttccccggctgggccgagcagcac
ggcaagtccggcgacctcgccggcatgctccacgaccccgatctggtcgcggccgtgcag
gacgcggtggacgacgccaacaaggcggtctcccaggccgagtccatccgcaagttcacg
atcctccccggggagtggaccgaggagggcggccagctgacgcccagcctcaagctcaag
cgcaacgtcgtcgtgcgcgaggcacgcgccgagatcgaggccctctacctcgggtga

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