Nocardioides renjunii: SHK17_13725
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Entry
SHK17_13725 CDS
T10238
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nrn Nocardioides renjunii
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nrn03016
]
SHK17_13725 (truB)
Enzymes [BR:
nrn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SHK17_13725 (truB)
Transfer RNA biogenesis [BR:
nrn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SHK17_13725 (truB)
Prokaryotic type
SHK17_13725 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WQQ20959
LinkDB
All DBs
Position
complement(2877703..2878560)
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AA seq
285 aa
AA seq
DB search
MVDPGLVVVDKSPGMTSHDVVARVRRLAGTRKVGHAGTLDPMATGVLVLGVDRATRLLGH
LMLTEKAYDATIRLGVSTTTDDAEGEVVETRGTGGVREDDVRAELARFVGDIEQVPTAVS
AIKVDGQRAYARVRAGEQVELAARPVTIHELAVTDVTLPEVRISVRCSSGTYIRAIARDL
GTALGVGGHLTALRRTAVGSFDLSVARTLDELADDFAMVPIADAARGTFASIDLDEEQAA
HVRFGRPLDLALPGDGAHAVFAPGGEFLALYEPHGARARPVAVFV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaccccggtctggtcgtcgtcgacaagtccccgggcatgacctcccacgacgtc
gtcgcccgggtccgccgcctcgccggcacccgcaaggtcggccacgccggcaccctcgac
ccgatggcgacgggtgtgctcgtgctgggcgtcgaccgggccacgcggctgctcgggcac
ctgatgctcaccgagaaggcctacgacgcgaccatccggctgggggtgtcgacgaccacc
gacgatgccgagggagaggtcgtcgagacgcgtggcaccggcggcgtgcgggaggacgac
gtacgcgcggagctggcgcggttcgtcggcgacatcgagcaggtcccgaccgccgtctcc
gcgatcaaggtcgacgggcagcgcgcctacgcgcgggtccgcgccggcgagcaggtcgag
ctcgcggcccggccggtgacgatccacgagctggccgtgaccgacgtgacgctgccggag
gtgcgcatctcggtccgctgctcgagcggcacctacatccgcgccatcgcgcgcgacctg
gggactgcgctgggcgtcggcggtcacctgacggcgctgcggcgcacggccgtcggctcc
ttcgacctctcggtcgcccgcacgctcgacgagctggccgacgacttcgccatggttccc
atcgccgacgccgcccgcggcacgttcgcctcgatcgacctcgacgaggagcaggctgcg
cacgtccggttcgggcgccccctcgacctggcgctgccgggggacggggcgcacgcagtc
ttcgcgccgggaggcgagttcctcgccctctacgagccgcacggcgcacgcgccaggccc
gtcgccgtcttcgtctga
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