Nocardioides renjunii: SHK17_14085
Help
Entry
SHK17_14085 CDS
T10238
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nrn Nocardioides renjunii
Pathway
nrn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHK17_14085 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrn03400
]
SHK17_14085 (mutM)
Enzymes [BR:
nrn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SHK17_14085 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SHK17_14085 (mutM)
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHK17_14085 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
DZR
DUF2688
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WQQ21027
LinkDB
All DBs
Position
complement(2954407..2955303)
Genome browser
AA seq
298 aa
AA seq
DB search
MPELPEVEVVRAGLERHVVGSTIAAVEVLHPRPVRRDHRGSTGFVAALVGQRITAVRRRG
KYFWLALAPQPGQSIGDALLGHLGMSGQMLLHEPGAPDERHLRVRFLLTPAEGASEARPL
EMRFVDQRMFGGLVVSDGGAGLPTEIVHIARDPIDPDFDDEEFVRRARRRTSAVKRLLLD
QGLISGVGNIYADEALWRARLHGERPGDRLTGPVLRELLGHVRAVMGEALAQGGTSFDAL
YVNVNGESGYFDRSLDAYGQEGQPCRRCGTPIRRVAFMNRSSFFCPTCQRPPRARPRP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgaggtcgtccgcgccggcctcgagcgccacgtcgtcggc
agcaccatcgcggccgtcgaggtgctgcacccgcgacccgtgcgccgcgaccaccgcggc
tccaccggcttcgtcgccgcgctggtcggccagcggatcacggccgtgcgccgtcgcggc
aagtacttctggctcgccctggcgccgcagccggggcagtcgatcggcgacgccctgctc
ggccacctcggcatgagcgggcagatgctgctgcacgagcccggcgcacccgacgagcgg
cacctgcgggtgcggttcctcctcaccccggccgagggcgcctccgaggcacggcccctc
gagatgcgcttcgtcgaccagcgcatgttcggcggcctcgtcgtctccgacggcggcgcc
gggctgccgaccgagatcgtgcacatcgcccgcgacccgatcgaccccgacttcgacgac
gaggagttcgtgcgccgcgcccgccggcgtacgtccgcggtcaagcggctgctcctcgac
cagggcctcatctccggggtgggcaacatctacgccgacgaggcgctgtggcgcgcccgg
ctgcacggcgagcgccccggcgaccggctcaccgggccggtgctgcgcgagctgctcggc
cacgtccgcgccgtcatgggcgaggcgctcgcccagggcggcacgtcgttcgacgcgctc
tacgtcaacgtcaacggcgagtcgggctacttcgaccggtccctcgacgcctacggccag
gagggccagccgtgccgcaggtgcggcacgcccatccgccgcgtcgccttcatgaaccgg
tcgtcgttcttctgccccacctgccagcgcccgccgcgggcccgtccccgcccctga
DBGET
integrated database retrieval system
