Nocardioides renjunii: SHK17_14170
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Entry
SHK17_14170 CDS
T10238
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nrn Nocardioides renjunii
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nrn03032
]
SHK17_14170
03036 Chromosome and associated proteins [BR:
nrn03036
]
SHK17_14170
03400 DNA repair and recombination proteins [BR:
nrn03400
]
SHK17_14170
DNA replication proteins [BR:
nrn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHK17_14170
Chromosome and associated proteins [BR:
nrn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SHK17_14170
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SHK17_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HC2
HU-CCDC81_bac_2
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
WQQ21043
LinkDB
All DBs
Position
complement(2969374..2970066)
Genome browser
AA seq
230 aa
AA seq
DB search
MNKTELIDALAARYEGNRKQAAHALESVLDTITREVAKGEKVAITGFGSFEKAVRNARWV
RNPQTGERMKSKKKAVPKFSAGKELKDVISGAKKLPRLTAATMPKPPGVRYAAAAVSSVT
GKKAAATKAPAKSTASTSTTSTTAAKKSAPAKKTTAKKASTTSKTAAKKAPAKKASTTSK
TAAKKAPAKTSAAKTSASKTSASKTSASKSTASKTTAAKKAPAKKTAKKS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagacagagctcatcgacgcgctcgccgcgcgttacgagggaaaccgcaagcag
gcggcacacgccctcgagtcggtcctcgacaccatcacccgtgaggtcgcgaagggcgag
aaggtcgccatcacgggcttcggctccttcgagaaggcggtgcgcaacgcgcgctgggtg
cgcaacccgcagaccggcgagcggatgaagtcgaagaagaaggccgtgccgaagttctcc
gccggcaaggagctcaaggacgtcatctcgggtgcgaagaagctgccccggctgactgcc
gccaccatgccgaagccgccgggtgtgcgctacgcggccgccgccgtgtcgtccgtgacg
ggcaagaaggccgcggcgaccaaggccccggcgaagtcgaccgcgtccacgagcacgacg
tcgacgacggccgcgaagaagtcggcaccggccaagaagaccaccgccaagaaggcctcg
acgacgtcgaagaccgccgcgaagaaggcgccggccaagaaggcctcgacgacgtcgaag
accgccgcgaagaaggcgccggccaagacgtcggccgccaagacctcggcgagcaagacg
tccgcgagcaagacgtccgcgagcaagtcgacggccagcaagacgacggcggccaagaag
gcgccggccaagaagaccgcgaagaagtcctga
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