Nocardioides renjunii: SHK17_14205
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Entry
SHK17_14205 CDS
T10238
Name
(GenBank) Ada metal-binding domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nrn Nocardioides renjunii
Pathway
nrn03410
Base excision repair
Brite
Enzymes [BR:
nrn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SHK17_14205
Transcription factors [BR:
nrn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SHK17_14205
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHK17_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQQ21050
LinkDB
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Position
complement(2974705..2976180)
Genome browser
AA seq
491 aa
AA seq
DB search
MTPTGHLDTEACYRAVQSRDRRFDGVFYTAVRTTGIYCRPSCPARTPAAGNVTFHPTSAS
AHAAGYRACKRCLPDATPGSPEWDVAADVAGRAMRLIADGLVDREGVDGLARRVGYTPRH
LGRLLTQQLGASALSLARARRAQSARVLIETTDLPLTDVAFAAGFASVRQFNETLREIYA
ASPTELRGRRGAAAGHGTVTMRLAVRTPFAGRRLLDFLAYHLVPGVETAGPGWYARTLDL
PHGPGTVRLELADLPADGRTGHVVADFRLEDLRDTAAASERVRRLLDADCDPRAVDEHLG
ADPALGDLVRATPGLRVPGQVDGDETAVRTVIGQQVSVTGARTVAGRLVAAHGRPVEAHV
PGLTHLFPDAATLAAVDPETLPMPRARGRALVGLATALADGTVALDRSPDRDDVRRALVA
LPGIGPWTADYVAMRALGHPDVFLPTDLAVRRLLADLGGSADPERWRPWRSYALMHLWNT
LMPDTPAPKEN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgaccggacacctcgacaccgaggcctgctaccgcgcggtgcagagccgtgac
cgtcgcttcgacggcgtcttctacaccgccgtgcgcaccaccggcatctactgccggccc
tcgtgcccggcacggaccccggccgccggcaacgtcaccttccaccccacatccgccagc
gcccacgccgcgggctaccgcgcctgcaagcgctgcctgcccgacgcgacgcccggcagc
cccgagtgggacgtcgccgcggacgtcgcgggccgggcgatgcggctgatcgccgacggg
ctcgtggaccgcgagggcgtggacggcctggcccgccgcgtcggctacaccccgcgccac
ctcggccggctgctcacccagcagctcggcgcgtcggcgctgtcgctcgcgcgggcccgc
cgtgcgcagagcgcacgggtgctcatcgagacgaccgacctgccgctcaccgacgtggcc
ttcgcggctggcttcgccagcgtgcgccagttcaacgagacgctccgcgagatctacgcc
gcgtcgccgaccgagctgcgcggccggcgcggcgcggcggccggccacggcaccgtcacc
atgcgcctcgcggtccgtacgccgttcgccggtcggcggctgctcgacttcctcgcttac
cacctggtgccgggcgtcgagaccgccggtcccggctggtacgcccgcacgctcgacctg
ccgcacggtcccgggacggtccgcctcgagctcgccgacctccccgccgacggtcgcacc
gggcacgtcgtcgccgacttccggctggaggacctgcgcgacaccgccgccgccagcgag
cgcgtacgccggctcctcgacgccgactgcgacccgcgcgcggtcgacgagcacctcggc
gccgaccctgcgctgggcgacctcgtccgggcgacgcccgggctgcgggtgcccggccag
gtcgacggcgacgagaccgcggtgcgcaccgtcatcggccagcaggtcagcgtcaccggt
gcccgcaccgtcgccggccgcctggtcgccgcgcacggccggccggtggaggcgcacgtg
cccggcctcacccacctcttcccggacgccgccacgctggcggcggtcgaccccgagacc
ctgccgatgccgcgcgcgcgtggtcgcgccctcgtcggcctggcgacggcgctcgccgac
ggcacggtcgcgctcgaccgcagccccgaccgcgacgacgtacgccgggcgctggtcgcc
ctgcccggcatcggaccctggaccgccgactacgtcgccatgcgcgcgctggggcacccc
gacgtcttcctgcccaccgacctcgccgtgcgcaggctgctcgccgacctgggcggctcg
gccgacccggagcggtggcggccgtggcgctcgtacgccctgatgcacctctggaacacc
ctgatgcccgacacccccgctccgaaggagaactga
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