Nocardioides renjunii: SHK17_14845
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Entry
SHK17_14845 CDS
T10238
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00550
Peptidoglycan biosynthesis
nrn01100
Metabolic pathways
nrn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHK17_14845 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SHK17_14845 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
SHK17_14845 (mrdA)
Enzymes [BR:
nrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SHK17_14845 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nrn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SHK17_14845 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WQQ21174
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All DBs
Position
complement(3113596..3115707)
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AA seq
703 aa
AA seq
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MSTTTRSRLRLVVVQALVFSLFATLFVRLYYLQVIGGESYQAQAADQSVRDIVVQPQRGL
IVDDQGRPLVANRTSWVISVDRTLLGKLEERQRTELVRRVSVVVDAEPEDVEARLVTCGD
PGSVRDVCWNGSPYQPVPVATDVPKSVALRVLEQPEDYPGVLAEQQSVRSYPRPFGINLA
HVLGYLSPVTEDEFDLAAERDDRSLNGASVVGRAGVEKQYDEWLRGLPGYRRVAVDSMGR
VLGDDSVVESTPGDTLVTSIDAKVQSVVERQLAERIKVQRATVDPVTGRRYEADSGAAVV
LDARTGRVVAMASQPTYDPDVWTGGISESELARLYSEEAGTPLLSRATQGQFAPGSTWKP
FMTAGALTNGYSTDTALACSSGFQVGNRVFKNYESGAYGSIGFAKALEVSCNTFFYRIGY
DFWQRFGSDPADLGAKDPLVQEAKDFGFGSRTGIDLPGEAPGRIADRRWKQAYYESQKDY
YCGIADKPQTDGTSDFVYRFSREFCLEGNLYRAGDAVNFSIGQGDTIVTPLQLARAYGAL
ANGGTLWAPTVAKALVSPDGTVLRRLAPRKVAEVDVPQKYLDYIDGALQNVSRVGTMAWK
LGGFPLDDVTVRAKTGSAEVYGKQSTGWVASYTEDYVVVMMISQGGTGSGSTGDGIRAIW
EALYGIEGETVRPARAAIPGTVSPARLPQFLDDGSIMPPAVGE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgaccaccaggagccggctccggctggtcgtcgtgcaggcgctggtgttctcc
ctcttcgcgacgctgttcgtccggctctactacctgcaggtcatcggcggggagtcctac
caggcgcaggccgccgaccagtcggtgcgcgacatcgtggtccagccgcagcggggcctc
atcgtcgacgaccagggccgtccgctcgtggccaaccgcacctcgtgggtcatctcggtc
gaccgcaccctgctcggcaagctcgaggagcgccagcgcaccgagctggtccgccgggtg
tccgtcgtcgtcgacgccgagcccgaggacgtcgaggcccggctggtcacctgcggcgac
cccggcagcgtccgcgacgtgtgctggaacggctcgccctaccagccggtcccggtcgcc
accgacgtccccaagtccgtcgcgctgcgggtgctcgagcagcccgaggactatcccggc
gtgctcgccgagcagcagagcgtccgctcctacccgcgacccttcggcatcaacctcgcc
cacgtgctcggctacctcagccccgtcaccgaggacgagttcgacctcgccgccgagcgc
gacgaccgctcgctcaacggcgcctcggtggtcggccgcgccggcgtcgagaagcagtac
gacgagtggctgcgcgggctgcccggctaccgccgcgtcgccgtcgactcgatgggccgc
gtcctgggcgacgactccgtcgtcgagagcacccccggcgacaccctcgtgacctcgatc
gacgccaaggtccagtcggtggtcgagaggcagctcgccgagcgcatcaaggtgcagcgc
gccaccgtcgacccggtcaccggacgccgctacgaggccgactccggcgccgcggtcgtc
ctcgacgcccgcaccggccgggtcgtcgcgatggccagccagccgacgtacgaccccgac
gtgtggaccggtggcatcagcgagtccgagctcgcccggctctactcggaggaggccggc
acgcccctgctgtcgcgcgccacccagggccagttcgcgcccggctcgacgtggaagccg
ttcatgaccgccggtgcgctgaccaacggctactccacggacaccgcgctggcgtgctcg
tccggcttccaggtcggcaaccgggtgttcaagaactacgagtccggggcctacggctcg
atcggcttcgcgaaggcgctcgaggtctcctgcaacacgttcttctaccgcatcggttac
gacttctggcagcgcttcggcagcgacccggccgacctcggcgccaaggacccgctggtg
caggaggcgaaggacttcggcttcggctcgcgcaccggcatcgacctgccgggcgaggcg
ccggggcgcatcgccgaccgccggtggaagcaggcctactacgagtcgcagaaggactac
tactgcggcatcgccgacaagccgcagaccgacggcacgagcgacttcgtctaccgcttc
tcccgcgagttctgcctcgagggcaacctctaccgcgccggcgacgccgtcaacttctcc
atcgggcagggcgacacgatcgtcaccccgctccagctggcccgtgcctacggcgcgctc
gccaacggcggcacgctgtgggccccgaccgtcgccaaggcgctggtcagcccggacggc
acggtcctgcgtcgcctcgcccctcgcaaggtggccgaggtcgacgtcccgcagaagtac
ctcgactacatcgacggcgcgctgcagaacgtcagcagggtcggcacgatggcgtggaag
ctcggcggcttccccctcgacgacgtcaccgtccgcgccaagaccggatcggccgaggtc
tacggcaagcagtccaccggctgggtcgcctcctacaccgaggactacgtcgtggtgatg
atgatcagccagggcggcaccggctccggctccaccggtgacggcatccgcgccatctgg
gaagccctctacggcatcgagggcgagaccgtacgccccgcgcgggcggcgatccccggc
accgtgtcgccggccaggctgccgcagttcctcgacgacgggtcgatcatgccgccggcc
gtgggggagtga
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