Nocardioides renjunii: SHK17_15100
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Entry
SHK17_15100 CDS
T10238
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nrn Nocardioides renjunii
Pathway
nrn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SHK17_15100 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nrn03019
]
SHK17_15100 (orn)
03009 Ribosome biogenesis [BR:
nrn03009
]
SHK17_15100 (orn)
Messenger RNA biogenesis [BR:
nrn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SHK17_15100 (orn)
Ribosome biogenesis [BR:
nrn03009
]
Eukaryotic type
Pre-60S particles
RNases
SHK17_15100 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WQQ21219
LinkDB
All DBs
Position
3170416..3171093
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AA seq
225 aa
AA seq
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MSDRLVWIDCEMTGLDLGADALIEVAALVTDFELNVLGEGLDVIIKPTAEALDQMVEFVR
SMHEKSGLLDELAGGTTLADAEEQVLAYIKEHCPDGSRPPLAGNTVATDRAFLARDMPAL
ESFLHYRIVDVSSIKELSRRWYPRAYFAAPTKRGNHRALADIQESIEELRYYREAVFVPQ
PGPDSAQARQIAARHGGQLTGLGPAAAAPDTGADSDAGADSGSTD
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacagactggtgtggatcgactgcgagatgaccggcctcgacctcggggccgac
gcgctgatcgaggtggcggcgctcgtgaccgacttcgagctcaacgtgctcggcgagggc
ctcgacgtcatcatcaagcccaccgccgaggcgctggaccagatggtcgagttcgtgcgc
agcatgcacgagaagtcgggcctgctcgacgagctcgccggcggtacgacgctcgcggac
gccgaggagcaggtgctcgcctacatcaaggagcactgccccgacggcagccgccccccg
ctcgccggcaacaccgtcgccaccgaccgggccttcctcgcccgcgacatgccggccctc
gagtcgttcctgcactaccggatcgtcgacgtctcctcgatcaaggagctgtcgcgccgg
tggtacccccgggcctacttcgcggccccgaccaagcgcggcaaccaccgcgcgctggcc
gacatccaggagagcatcgaggagctgcgctactaccgcgaggccgtcttcgtgccgcag
cccgggcctgacagcgcccaggcgcgccagatcgccgcgcggcacggcggccagctgacc
gggctcggtcccgcggcggccgctcccgacaccggggccgattccgacgccggggccgat
tccggttctacggactga
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