Nocardioides renjunii: SHK17_16690
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Entry
SHK17_16690 CDS
T10238
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nrn Nocardioides renjunii
Pathway
nrn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHK17_16690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrn03400
]
SHK17_16690
Enzymes [BR:
nrn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHK17_16690
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHK17_16690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WQQ21519
LinkDB
All DBs
Position
complement(3481301..3482137)
Genome browser
AA seq
278 aa
AA seq
DB search
MTVPPVALPHPLVGGAFTSPVAPGTGWPDDPGAPDTPVARDADDVRRLARDARLAELEAR
VSVCSACPRLVGWREGVAVEKRASFADQPYWGRPIPGWGDPEASLLVVGLAPAANGGNRT
GRIFTGDPSADWLFASLHRTGWAVQATSEHAGDGQRLVDARMVATVRCAPPDNKPTTVER
DTCAPWIAAELALLPTVRVVVALGSFGWDGAVRSLVAAGAPAPARKPRFGHGAELRLGDV
TLLGCYHPSPHNTYTRRLTREMTDEVFERARALTESTV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcccccggtcgcgctgccccaccccctcgtcggcggggcgttcaccagcccg
gtggcgcccggcaccggctggcccgacgaccccggagcgcccgacaccccggtggctcgt
gacgccgacgacgtacgacgactcgcgcgggacgccaggctcgcggagctggaggcccgg
gtgagcgtctgctcggcgtgcccgcggctcgtcgggtggcgcgagggtgtcgcggtcgag
aagcgcgcgtcgttcgccgaccagccctactggggccgcccgatccccggctggggcgac
cccgaggcgtcgctgctcgtcgtcggcctggccccggccgccaacggcggcaaccggaca
ggccggatcttcaccggcgacccgagcgccgactggctcttcgcgagcctgcaccgcacc
ggctgggcggtgcaggccaccagcgagcacgccggcgacggccagcgcctggtcgacgcg
cggatggtggcgacggtgcgctgcgccccgcccgacaacaagccgacgaccgtcgagcgc
gacacgtgcgcgccgtggatcgccgccgagctggccctcctcccgaccgtgcgggtggtg
gtggcgctcgggtccttcggctgggacggcgccgtgcggtcgctcgtggcggccggcgcg
ccggcaccggcccggaagccgcggttcggccacggcgcggagctgcggctcggcgacgtg
acgctgctcggctgctaccacccctcgccgcacaacacctacacccgcaggctcacccgg
gagatgaccgacgaggtcttcgagcgggcccgggcgctgacagaatcgacggtgtga
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