Nocardioides renjunii: SHK17_16845
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Entry
SHK17_16845 CDS
T10238
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00300
Lysine biosynthesis
nrn00470
D-Amino acid metabolism
nrn01100
Metabolic pathways
nrn01110
Biosynthesis of secondary metabolites
nrn01120
Microbial metabolism in diverse environments
nrn01230
Biosynthesis of amino acids
Module
nrn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHK17_16845
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHK17_16845
Enzymes [BR:
nrn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SHK17_16845
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF2859
DELLA
Motif
Other DBs
NCBI-ProteinID:
WQQ21550
LinkDB
All DBs
Position
complement(3516866..3518092)
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AA seq
408 aa
AA seq
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MRTEEHLAAFGRDGAALEVAGIPLERLAARVGSTPFFAYDRAAITTRVAEVRAALPDRVG
LGYAVKANPMPAVVQHLSRLVDSLDVASAGELAIALDTGHDPARISFAGPGKTDAELRRA
VAAGAVVEIESRTELQRLVRTGKELAVRPQAAVRVNPPFAVKGSGMRMGGGPQQFGVDAE
MVPSLLGEVSPGDVDVLGFHVFAGSQNLRADILVEAQARTVDLVLELATHLRDEVRYVNL
GGGFGIPYFEKDERLDLALVGQRLGELLDERLVEDLPHAAVSLELGRYLVGEAGVYVTQV
VDVKESRGQAYAVVDGGMHHQLAASGNFGQVIRRNYPMALGNRLGDPDTGPVTVVGCLCT
PLDLLGDSVELPRPDVGDLVVVFQAGAYGLTASPTAFLGHPAPAEVLL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgaggagcacctggccgccttcggccgcgacggtgccgcactggaggtcgcg
ggcatcccgctcgagcggctcgcggcccgcgtcgggtccacgccgttcttcgcctacgac
cgggcggcgatcaccacgcgggtcgccgaggtgcgcgcggcgctgcccgaccgggtcggg
ctcggctacgccgtcaaggccaacccgatgccggccgtggtgcagcacctgtcgcgtctc
gtcgactcgctcgacgtcgcgtcggcgggcgagctcgcgatcgcgctcgacaccgggcac
gacccggcccggatcagcttcgccggtcccggcaagaccgacgccgagctgcgccgggcg
gtcgccgccggtgcggtggtcgagatcgagtcgcgcaccgagctccagcgcctggtgcgc
accggcaaggagctcgcggtgcgcccgcaggccgccgtccgggtcaacccgccgttcgcg
gtcaagggctcggggatgcggatgggcggcggaccgcagcagttcggcgtcgacgccgag
atggtgccctcgctgctcggcgaggtgtcgcccggcgacgtcgacgtcctcggcttccac
gtcttcgccggctcgcagaacctccgcgccgacatcctggtcgaggcacaggcccgcacc
gtcgacctcgtcctcgagctggccacgcacctgcgcgacgaggtgcgctacgtcaacctc
ggcggcggcttcggcatcccctacttcgagaaggacgagcgtctcgacctcgccctggtc
gggcagcgcctcggcgagctgctcgacgagcgcctggtcgaggacctcccgcacgcggcc
gtctcgctggagctcggtcgttacctcgtgggcgaggccggcgtctacgtgacgcaggtg
gtggacgtgaaggagtcccgcggccaggcctacgccgtggtcgacggcggcatgcaccac
cagctcgccgcgtccggcaacttcggccaggtcatccgccgcaactacccgatggccctg
ggcaaccgcctcggcgaccccgacaccggtcccgtgaccgtcgtcgggtgcctgtgcacc
ccgctcgacctgctcggcgactccgtcgagctgccccgcccggacgtcggcgacctcgtc
gtggtgttccaggcgggcgcctacggcctcaccgccagcccgacggccttcctcggccac
ccggcgcccgcggaggtcctgctgtga
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