Nocardioides renjunii: SHK17_17245
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Entry
SHK17_17245 CDS
T10238
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
nrn Nocardioides renjunii
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrn03400
]
SHK17_17245
Enzymes [BR:
nrn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SHK17_17245
DNA repair and recombination proteins [BR:
nrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SHK17_17245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WQQ21628
LinkDB
All DBs
Position
complement(3606699..3608201)
Genome browser
AA seq
500 aa
AA seq
DB search
MTTRWLFGDQLGPHFADDHQGPLLMVESIGVLRRRRFHRAKAHLVLSAMRHRAAEAGERM
TYVQADTYTEVVAQHQDAGDVEVLHPTSYAALGLVERLGVTVLPARGYATAREDFERWAE
GRGSRRLLMEDFYRRARLAHGVLVDGGEPVGGRWNFDHDNRLPPPKGAETLGVTDPWWPT
EDEIDAEVREDLDRWERDGTVRTIGSDGPRLFAATRAEALAALEHFVEHRLPEFGAYEDA
ILEGDPWMAHSLISASMNLGLLDPLEVVERAEQAYRSGAAPIASVEGFVRQVIGWRDYVW
HTYWNQGDDYRHENALGARQRLPQWFAELDADATDARCLSHTLGRLSEHGWVHHIPRLMV
LGSYALQRGWSPQQLTDWFHRAFVDGYDWVMVANVVGMSQHADGGVMMTKPYTSGGAYIN
KMSDHCGSCRFDPKVRVGDDACPFTAGYWWFLDRHRETFAGNHRMGRALQGLDRLKDLPL
LVEQEERRGNRAPRVSDQTD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcgatggctcttcggcgaccagctgggcccccacttcgccgacgaccaccag
ggcccgctgctgatggtggagtcgatcggcgtgctgcgccggcgccggttccaccgcgcc
aaggcccatctggtgctgagcgcgatgcgccaccgggccgccgaggcgggcgagcggatg
acctacgtgcaggcggacacctacaccgaggtggtcgcgcagcaccaggatgccggtgac
gtcgaggtcctgcacccgacgtcgtacgccgcgctggggctggtcgagcggctcggcgtg
acggtgctgccggcccgcggctacgcgacggcgcgcgaggacttcgagcgctgggccgag
gggcgggggagcaggcggctcctgatggaggacttctaccggcgcgcccggctggcgcac
ggcgtgctggtcgacggcggggagccggtcggcggcaggtggaacttcgaccacgacaac
cggctgccaccgccgaagggcgccgagacgctcggcgtcaccgacccgtggtggccgacc
gaggacgagatcgacgccgaggtgcgcgaggacctcgaccggtgggagcgcgacgggacc
gtccggaccatcggcagcgacggcccgcgcctcttcgccgccacccgggcggaggcgctg
gccgcgctggagcacttcgtcgagcaccggctgcccgagttcggtgcctacgaggacgcg
atcctcgagggcgacccgtggatggcgcacagcctcatcagcgcctcgatgaacctcggc
ctcctcgacccgctcgaggtcgtcgagcgcgccgaacaggcgtaccgcagcggcgcggcg
cccatcgcgagcgtcgaggggttcgtgcggcaggtgatcggctggcgcgactacgtgtgg
cacacctactggaaccagggcgacgactaccgccacgagaacgcgctcggcgcgcggcag
cggctgccgcagtggttcgccgagctcgacgcggacgccacggacgcgcgctgcctctcg
cacacgctcggtcgtctctccgagcacggctgggtgcaccacatcccgcggctgatggtg
ctggggtcgtacgccctgcagcgcggctggtcgccgcagcagctcaccgactggttccac
cgggcgttcgtggacggctacgactgggtgatggtggccaacgtcgtcggcatgtcgcag
cacgccgacggcggggtgatgatgaccaagccctacacgtcgggcggtgcctacatcaac
aagatgtcggaccactgcggctcctgccgcttcgaccccaaggtccgcgtcggggacgac
gcctgccccttcaccgccggctactggtggttcctcgaccggcaccgcgagacgttcgcc
ggcaaccaccggatgggccgcgcgctgcagggcctggaccggctcaaggacctcccgctc
ctcgtggagcaggaggagcggcgcggcaaccgggcaccccgcgtcagcgaccagacggac
tag
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