Nocardioides renjunii: SHK17_17530
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Entry
SHK17_17530 CDS
T10238
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
nrn Nocardioides renjunii
Pathway
nrn02024
Quorum sensing
nrn03060
Protein export
nrn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SHK17_17530 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SHK17_17530 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SHK17_17530 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nrn02044
]
SHK17_17530 (secD)
Secretion system [BR:
nrn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SHK17_17530 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
CCDC-167
Motif
Other DBs
NCBI-ProteinID:
WQQ21684
LinkDB
All DBs
Position
complement(3655337..3657622)
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AA seq
761 aa
AA seq
DB search
MSRGVWVRFILVLGLLAGCALLAINVKPNLGLDLRGGAQFVFEAEGTEQTPATAENVDKT
LQVLRGRVDALGVAESTLVRQGENRILVELPGVTNDEEAQEAEDRIGTTAKLTIHEVIAT
AEPDAEPSKNKNLVLPSDQGDTLEVGPTVIQGEEITGASAVQREQSVDWVVAIDFDGKGG
DTWADITGTAACNPSGDPKRRIAIVLDGEIISSPEVNTGVGCDVGIRGGSTDITGSYTPT
EAKDLAALIQGGALPLELTAISDRLVGPSLGEEAIDASIEAGIIGLLLTGLFIVVVYRLV
GLMATIALGSYALLAYAMLVGLGSTLTLPGLAGFVLAIGMAIDANVLVFERAREEYAAYP
SAGLRRALAVGFNKAWTAIIDSNVTTLLAAGLLFFLGSGPIKGFGVTLSIGVVASMVSAL
IIARVLCDLAVANKPVNRKPAISGLGDIGKVRTWLDRKDPDIMSSRRTWLGVSAVALVIA
VTGIATQGLNLGVEFTGGRQLDYSVSESVTIEQARTAVADAGFPEAVVQTADTADFTVRT
GEISNEEEQRIEDELAAVGGEVTKVDDQQIGASLGEELRNNALIAFGVAFLAQLLYLAIR
FKWTFGVSAVVAMAHDVVLVVGLFAWLHKPIDGIFLAAAMTIVGLSVNDTVVVFDRVRER
WYGSKPEDDFRTLANKAAVETIPRTVNTGLGSMFILAALAVLGGDSLQDFAIALLVGLIV
GTYSSIFMATPLLTYMQEKWPLSRVKKEKVERTPEDSGAVV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtggtgtctgggtccgtttcatcctcgtgctcggcctcctggccgggtgcgcg
ctgcttgcgatcaacgtcaagcccaacctcggcctcgacctccggggcggcgcgcagttc
gtcttcgaggcagagggcaccgagcagacccccgccaccgcagagaacgtcgacaagacc
ctgcaggtgctccgcggccgcgtcgacgccctcggtgtcgccgagtcgacgctcgtgcgc
cagggcgagaaccgcatcctcgtcgagctccccggcgtcacgaacgacgaggaggcgcag
gaggccgaggaccggatcggcaccaccgccaagctgacgatccacgaggtcatcgccacc
gccgagcccgacgccgagccgagcaagaacaagaacctcgttctcccctccgaccagggc
gacaccctcgaggtcggtcccacggtcatccagggcgaggagatcaccggcgcgagcgcg
gtgcagcgcgagcagagcgtcgactgggtcgtcgcgatcgacttcgacggcaagggtggc
gacacctgggccgacatcaccgggacggccgcctgcaacccgtccggcgaccccaagcgc
cgcatcgcgatcgtgctcgatggcgagatcatctcctcgcccgaggtcaacaccggcgtc
ggctgcgacgtcggcatccgtggcggctccaccgacatcaccggcagctacacgcccacc
gaggccaaggacctcgccgccctcatccagggcggcgcgctgccgctcgagctgaccgcc
atctccgaccgactcgtcggcccctcgctcggtgaggaggcgatcgacgcctcgatcgag
gccggcatcatcggcctgctgctcaccggcctcttcatcgtggtcgtctaccgcctcgtc
ggcctgatggcgaccatcgcgctggggtcgtacgccctgctcgcctacgccatgctcgtc
gggctcgggtccacgctgacgctgcccggcctcgccggattcgtgctcgccatcggcatg
gcgatcgacgccaacgtcctcgtcttcgagcgagcccgggaggagtacgccgcgtacccc
tccgcgggcctgcgtcgggcactggcggtcggcttcaacaaggcgtggaccgcgatcatc
gactccaacgtcacgacgctcctcgcggccggcctcctgttcttcctcggctccggcccg
atcaagggcttcggtgtcacgctgtccatcggtgtcgtcgcgtccatggtctccgcgctg
atcatcgcccgggtcctctgcgacctggccgtggccaacaagccggtcaaccgcaagccg
gccatcagcggcctcggcgacatcggcaaggtgcgcacctggctggaccgcaaggacccc
gacatcatgagcagccgccggacctggctcggcgtgtcggcggtcgcgctggtcatcgcg
gtgaccggcatcgcgacccagggcctcaacctcggcgtggagttcaccggcgggcgccag
ctcgactactccgtcagcgagtcggtcaccatcgagcaggcccgcacggccgtggccgac
gccggcttccccgaggccgtcgtgcagaccgccgacaccgccgacttcaccgtccgcacc
ggggagatctccaacgaggaggagcagcggatcgaggacgagctggcagcggtcggcggc
gaggtcaccaaggtcgacgaccagcagatcggcgcctcgctcggtgaggagctgcgcaac
aacgccctcatcgcgttcggggtggcgttcctggcccagctgctctacctcgccatccgc
ttcaagtggaccttcggcgtctccgccgtggtcgccatggcgcacgacgtcgtgctggtg
gtcggcctcttcgcctggctgcacaagccgatcgacggcatcttcctggcggcggcgatg
accatcgtcggtctgtcggtcaacgacaccgtcgtcgtcttcgaccgcgtccgcgaacgc
tggtacggctccaagccggaggacgacttccgcacgctcgccaacaaggcggccgtcgag
accatcccccgcacggtcaacaccggtctcggctcgatgttcatcctcgccgcgctcgcc
gtcctcggcggcgactcgctgcaggacttcgccatcgcgctgctcgtcgggctcatcgtc
ggtacgtactcctcgatcttcatggccaccccgctcctcacctacatgcaggagaagtgg
ccgctcagccgggtgaagaaggagaaggtcgagcggacgccggaggactcgggcgccgtc
gtctga
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