Nocardioides renjunii: SHK17_18685
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Entry
SHK17_18685 CDS
T10238
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00061
Fatty acid biosynthesis
nrn00071
Fatty acid degradation
nrn01100
Metabolic pathways
nrn01212
Fatty acid metabolism
nrn02024
Quorum sensing
nrn04146
Peroxisome
Module
nrn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SHK17_18685
00071 Fatty acid degradation
SHK17_18685
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SHK17_18685
09145 Cellular community - prokaryotes
02024 Quorum sensing
SHK17_18685
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nrn01004
]
SHK17_18685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nrn04147
]
SHK17_18685
Enzymes [BR:
nrn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SHK17_18685
Lipid biosynthesis proteins [BR:
nrn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SHK17_18685
Exosome [BR:
nrn04147
]
Exosomal proteins
Exosomal proteins of breast milk
SHK17_18685
Exosomal proteins of breast cancer cells
SHK17_18685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WQQ21903
LinkDB
All DBs
Position
complement(3891175..3892758)
Genome browser
AA seq
527 aa
AA seq
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MANLSSLLEGSAQAHPDRTAVVLGDTRLTYAQVDAAANQVANLLVSRGIEAGDKVALSCP
NLPYFPIVYYGILKAGATVVPLNVLLKGREVAYHLDDSDAKAYFCFQGTPELPIGAEGHA
GFEQTDGCEHFFVITADPAAESPIEGAQTLGQALKGQSPVFETREVGADDTAVILYTSGT
TGQPKGAELMHRNMISNALVSDALFGADADDPDTLLCVLPLFHSFGQTVIMNAGFAFGGT
VVLLPRFEAGPALALMDKEDVTFFAGVPTMYWGLLGALDDSGVDVKKLADTLRVAAAGGS
ALPVEVHKEFERRFGVTILEGYGLSETSPVSSFSVWGEPARVGSIGKPIPGVEMKLISPE
PGVREDLRDAEDGEDPEKVVGEIAIKGPNIMKGYHGRPDATAEAIVDGWFRSGDLARKDA
DGWYYIVDRSKDMIIRGGYNVYPREIEEVLLTHPDVSLAAVIGVPHESHGEEIKAVVIRN
DGATVTEDELVEWGKEQMAGYKYPRVVQFVDALPMTATGKILKRELS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctctcctcgctcctcgaaggctccgcgcaggcgcaccccgaccgtacggcg
gtggtgctgggcgacacccggctcacctacgcgcaggtggacgccgcagccaaccaggtg
gccaacctgctggtctcgcgcggcatcgaggcgggcgacaaggtggcgctgagctgcccg
aacctgccctacttcccgatcgtctactacggcatcctcaaggccggggcgaccgtcgtg
ccgctcaacgtcctgctcaagggccgcgaggtggcctaccacctcgacgactccgacgcg
aaggcctacttctgcttccagggcacccccgagctccccatcggggccgagggtcacgcc
ggcttcgagcagaccgacgggtgcgagcacttcttcgtgatcaccgccgacccggccgcc
gagtcgcccatcgagggggcgcagacgctgggccaggccctgaagggccagtcgccggtc
ttcgagacgcgcgaggtcggcgccgacgacacggccgtcatcctctacacgtccggcacc
accggccagcccaagggcgccgagctcatgcaccgcaacatgatctccaacgccctcgtc
agcgacgcgctgttcggcgccgacgcagatgatcccgacacgctgctctgcgtgctgccg
ctgttccactccttcggccagaccgtgatcatgaacgccggcttcgcgttcggcggcacg
gtcgtgctgctgccgcggttcgaggcgggtccggcgctggcgctcatggacaaggaggac
gtcaccttcttcgccggggtgccgacgatgtactggggcctgctgggcgccctcgacgac
tccggcgtcgacgtgaagaagctcgccgacacgctgcgggtcgcggcggccggcggctcc
gcgctgcccgtggaggtgcacaaggagttcgagcgccgcttcggcgtgaccatcctcgag
ggctacggcctgtccgagacctcgcccgtctcgagcttctcggtctggggcgagcccgcg
cgcgtcggctcgatcggcaagccgatcccgggcgtggagatgaagctgatcagccccgag
cccggggtgcgcgaggacctgcgggacgcggaggacggcgaggaccccgagaaggtcgtc
ggcgagatcgcgatcaagggccccaacatcatgaagggctaccacggccgccccgacgcc
accgccgaggcgatcgtcgacggctggttccgctcgggcgacctcgcccgcaaggacgcc
gacggctggtactacatcgtcgaccggtccaaggacatgatcatccgcggtggctacaac
gtctacccgcgcgagatcgaggaggtcctgctgacccacccggacgtctcgctcgcggcc
gtcatcggcgtgccccacgagagccacggcgaggagatcaaggccgtcgtcatccgcaac
gacggcgccacggtgaccgaggacgagctggtggagtggggcaaggagcagatggcgggc
tacaagtacccccgcgtcgtccagttcgtcgacgccctcccgatgaccgcgaccggcaag
atcctcaagcgcgagctgagctga
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