Nocardioides renjunii: SHK17_18980
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Entry
SHK17_18980 CDS
T10238
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
nrn Nocardioides renjunii
Brite
Chaperones and folding catalysts [BR:
nrn03110
]
Heat shock proteins
HSP100
SHK17_18980 (clpB)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WQQ21961
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Position
complement(3950046..3952628)
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AA seq
860 aa
AA seq
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MSQFGAEKFTTRSREVIEAAQLAATTGGNTNTEPIHLLVALLQQEDGATRSLVQKAGVDA
ADLLAKAVRVQRALPSATGSTVQQPSASAALTRVLASSLDLAGSMRDDYVATDHLLVALA
TVESSAQKVLTDAGLDAAGLREAITAVRGNRRVTSESAEASYESLEKYSVDLTRAAEDGR
LDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPDSLKGRR
VLSLDLAAMVAGAKYRGEFEERLKAVLEEIKDAGGQVITFIDELHTVVGAGAGGDSAMDA
GNMLKPMLARGELHMIGATTLDEYRERIEKDPALERRFQQVFVGEPTVEDTIQILRGIQE
KYEAHHGVRITDAALVAAATLSDRYITGRQLPDKAIDLIDEAASRLRMEHESSPEEIDVL
RRQVDRLKMEQFALEKETDPASVERLEVLQKDLADREEELRGLEARWEREKDQLQGEGEL
RRQLDQLKIEAEKKLREGDLAGASEIQYGRIPELEKQIAEVEKAEQLDLEPLVGEEVGAE
QIADVVEAWTGIPTGRMLQGETAKLLEMEQVIGERLIGQREAVTAVSDAVRRSRAGISDP
NRPTGSFLFLGPTGTGKTELAKSLADFLFDDERAIVRIDMSEYSEKHSVSRLVGAPPGYV
GYDEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTLL
ILTSNLGSNFLVDPLMEPEVKKESVMGVVRAHFKPEFLNRLDEVVLFDALTKDDLAHIVD
LQLTLLEKRLAVRRINISVTDAARAWLAEIGYDPAYGARPLRRLIQSAIGDPLARKLIGG
EVTDGGSVTVDAGPDGLVLA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagttcggtgccgagaagttcaccacccgcagccgcgaggtcatcgaggctgcc
cagctcgccgccaccaccggcggcaacaccaacaccgagccgatccacctgctcgtcgcc
ctgctccagcaggaggacggcgcgacccgcagcctcgtccagaaggcaggcgtcgacgcc
gccgacctgctggcgaaggccgtccgggtgcagcgcgccctgcccagcgccaccggctcg
accgtccagcaaccgagcgcctcggcggcgctgacccgcgtcctcgcctcgtcgctcgac
ctggccggctcgatgcgcgacgactacgtcgccaccgaccacctgctcgtggccctcgcc
accgtcgagtcctcggcccagaaggtcctgaccgacgccggtctcgacgcggccggcctg
cgcgaggcgatcacggccgtccgcggcaaccgccgggtgaccagcgagagcgccgaggcg
tcgtacgagtcgctggagaagtacagcgtcgacctcacccgggcagcggaggacgggcgc
ctcgaccccgtgatcggccgcgacgccgagatccgacgggtggtccaggtcctctcgcgg
cgcaccaagaacaaccccgtgctcatcggcgagccgggcgtcggcaagaccgccgtcgtc
gagggcctcgcccagcgcgtcgtcgccggtgacgtccccgactccctcaagggtcgtcgc
gtgctgtcgctcgacctggccgcgatggtggccggcgcgaagtaccgcggcgagttcgag
gagcggctcaaggccgtgctcgaggagatcaaggacgccggcgggcaggtcatcacgttc
atcgacgagctgcacacggtcgtcggcgcgggcgccggcggcgactccgcgatggacgcc
ggcaacatgctcaagccgatgctcgcgcgcggcgagctgcacatgatcggcgcgaccacg
ctcgacgagtaccgcgagcggatcgagaaggaccccgccctcgagcgccgcttccagcag
gtcttcgtcggcgagcccaccgtcgaggacaccatccagatcctgcgcggcatccaggag
aagtacgaggcgcaccacggcgtgcgcatcaccgacgccgcgctcgtcgccgccgcgacg
ctgtccgaccgctacatcaccggccgccagctgcccgacaaggcgatcgacctcatcgac
gaggccgcctcgcggctgcggatggagcacgagtcctccccggaggagatcgacgtgctg
cgccgccaggtcgaccggctcaagatggagcagttcgcgctcgagaaggagaccgacccc
gcgtcggtcgagcggctcgaggtgctgcagaaggacctcgccgaccgcgaggaggagctg
cgcggcctcgaggcccgctgggagcgcgagaaggaccagctccagggcgagggcgagctg
cgccgccagctcgaccagctcaagatcgaggccgagaagaagctgcgcgagggcgacctc
gccggcgccagcgagatccagtacggccgcatccccgagctcgagaagcagatcgccgag
gtggagaaggccgagcagctcgacctcgagccgctggtcggcgaggaggtcggtgccgag
cagatcgccgacgtcgtcgaggcctggaccggcatcccgaccggcaggatgctgcagggc
gagaccgccaagctgctcgagatggagcaggtgatcggtgagcgcctcatcggccagcgc
gaggccgtgaccgcggtcagcgacgccgtacgccgctcgcgggccgggatctccgacccc
aaccggccgaccgggtcgttcctcttcctcggcccgaccggcaccggcaagaccgagctg
gccaagtcgctcgccgacttcctcttcgacgacgagcgggcgatcgtccgcatcgacatg
agcgagtacagcgagaagcactcggtctcgcggctcgtcggtgcgccgcccggctacgtc
ggctacgacgagggcggccagctcaccgaggccgtgcggcgccggccctacagcgtggtg
ctgctcgacgaggtcgagaaagcacacccggaggtcttcgacatcctgctgcaggtgctc
gacgacggccggctcaccgacggccagggccgcacggtcgacttccgcaacaccctgctg
atcctgacctccaacctcggctcgaacttcttggtcgacccgctcatggagccggaggtc
aagaaggagtcggtgatgggcgtggtccgggcgcacttcaagcccgagttcctcaaccgg
ctcgacgaggtcgtcctgttcgacgcgctcaccaaggacgacctggcccacatcgtcgac
ctccagctcacgctgctcgagaagcggctcgccgtgcggcggatcaacatctcggtgacc
gacgcggcacgcgcctggctggccgagatcggctacgacccggcgtacggcgcccggccg
ctgcgccggctgatccagtcggcgatcggcgacccgctcgctcggaagctgatcggcggc
gaggtcaccgacggcggctcggtcaccgtcgacgccggacccgacgggctagtcctcgcc
tag
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