Nocardioides renjunii: SHK17_20180
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Entry
SHK17_20180 CDS
T10238
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
nrn Nocardioides renjunii
Pathway
nrn00071
Fatty acid degradation
nrn00280
Valine, leucine and isoleucine degradation
nrn00310
Lysine degradation
nrn00362
Benzoate degradation
nrn00380
Tryptophan metabolism
nrn00410
beta-Alanine metabolism
nrn00640
Propanoate metabolism
nrn00650
Butanoate metabolism
nrn00907
Pinene, camphor and geraniol degradation
nrn00930
Caprolactam degradation
nrn01100
Metabolic pathways
nrn01110
Biosynthesis of secondary metabolites
nrn01120
Microbial metabolism in diverse environments
nrn01200
Carbon metabolism
nrn01212
Fatty acid metabolism
Module
nrn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
nrn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SHK17_20180
00650 Butanoate metabolism
SHK17_20180
09103 Lipid metabolism
00071 Fatty acid degradation
SHK17_20180
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SHK17_20180
00310 Lysine degradation
SHK17_20180
00380 Tryptophan metabolism
SHK17_20180
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SHK17_20180
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SHK17_20180
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SHK17_20180
00930 Caprolactam degradation
SHK17_20180
Enzymes [BR:
nrn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SHK17_20180
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SHK17_20180
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SHK17_20180
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
AlaDh_PNT_C
2-Hacid_dh_C
DUF6887
SHOCT-like_DUF2089-C
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
ThiF
ApbA
NAD_binding_8
Shikimate_DH
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
WQQ22194
LinkDB
All DBs
Position
complement(4211186..4213408)
Genome browser
AA seq
740 aa
AA seq
DB search
MTSTDTQTAVRYDRDADGIVTLTLDDPTASANTMNELYQSSMEAAVARLHEEQDDVTGVV
LASAKKTFFAGGNLKNMMSATPDDAEEIFAMGEAVKASLRRLETFPRPVVAAINGAALGG
GLEIALAANHRIAVDDRSVKIGLPESTLGLLPGGGGVTRVVRMLGLQSALMDVLMPGTQF
DPRGALAKGLVDELVATREELLPAARAWVLEHRDDEDAARNPWDRAGYKMPGGTPRTPAL
AQFLPAFPALLRKQTKGAVYPAPRAIMSAAVEGAQVDFDTASRIESRYFTNLVVSQQAKN
MIQAFFFDLQAINSGSLRPQGIERWQATKVGVLGAGMMGAGIAYSCARAGMEVVLKDVSV
EAAEKGRAYTAKLNAKGVERGKITAEKADELLSRITATASPEDLAGCDLVIEAVFEDPSL
KAKVFAEVAPYVDADALLCSNTSTLPITELAIGVDRPADFIGLHFFSPVDKMPLVEIIRG
AETSDVALARAYDVVQQIRKTPIVVNDARGFYTSRVIGTQINEGLTMLAEGVHPVSLERA
ATSAGFPVGPLQISDELNMELMAKIRKATEDAAAREGIELGDYPAGDVIATMIGLGRPSR
LKGAGFYDYDEDGRRTTLWPGLAETFPVAEQQPPIRDVRDRMLFIEALETAKCFEEGVIT
SAAAANIGSIMGIGFPALTGGAAQFMTGWQALDETGHGVGPIGLDAFLARADELAEAYGE
RFRPTAYLRELAASGRSFPA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaccgacacccagaccgccgtccgctacgaccgcgacgccgacggcatcgtc
accctgaccctcgacgacccgacggccagcgccaacaccatgaatgagctctaccagtcg
tccatggaggcggcggtcgcccgcctgcacgaggagcaggacgacgtcaccggcgtcgtg
ctcgcgagcgccaagaagaccttcttcgccggcggcaacctcaagaacatgatgagcgcc
accccggacgacgccgaggagatcttcgcgatgggtgaggccgtcaaggccagcctgcga
cggctcgagacctttccccgcccggtcgtggcggcgatcaacggcgccgcgctcggcggc
ggcctggagatcgcactggccgcgaaccaccgcatcgccgtcgacgaccgctcggtgaag
atcggcctgccggagtcgacgctcggcctgctgcccggcggcggcggggtcacccgcgtc
gtacgcatgctggggctgcagtcggccctgatggacgtcctcatgcccggcacgcagttc
gacccgcggggcgcgctcgccaagggcctcgtcgacgagctcgtggcgacccgcgaggag
ctgctgccggccgcgcgggcgtgggtcctcgagcaccgcgacgacgaggacgcggcgcgc
aacccgtgggaccgcgcgggctacaagatgcccggcggcactcccaggaccccggcgctc
gcgcagttcctgccggccttcccggcgctgctgcgcaagcagaccaagggcgccgtctac
cccgccccgcgcgccatcatgagcgccgcggtcgagggcgcgcaggtggacttcgacacc
gcctcgcgcatcgagagccgctacttcaccaacctcgtggtgagccagcaggccaagaac
atgatccaggccttcttcttcgacctccaggccatcaactcgggctcgctgcgcccgcag
ggcatcgagcgctggcaggccaccaaggtgggcgtgctcggcgccgggatgatgggcgcc
gggatcgcctactcctgcgcccgcgccggcatggaggtcgtcctcaaggacgtctcggtc
gaggccgccgagaagggcagggcctacaccgccaagctcaacgccaagggtgtcgagcgc
gggaagatcacggccgagaaggccgacgagctgctgagccggatcaccgccaccgcctcg
cccgaggacctcgccggctgcgacctggtgatcgaggccgtcttcgaggacccctcgctc
aaggccaaggtcttcgccgaggtggcgccgtacgtcgacgccgacgcgctgctgtgctcc
aacacctccaccctgccgatcaccgagctggccatcggcgtcgaccgcccggccgacttc
atcggcctgcacttcttcagccccgtcgacaagatgccgctggtcgagatcatccgcggc
gcggagacctcggacgtggcgctcgccagggcctacgacgtcgtgcagcagatccgcaag
acgccgatcgtggtcaacgacgcgcgcggcttctacacctctcgcgtcatcggcacccag
atcaacgagggcctcacgatgctcgccgagggcgtgcacccggtctcgctggagcgggcc
gcgacgtcggccggcttcccggtcgggccgctgcagatcagcgacgagctcaacatggag
ctgatggccaagatccgcaaggccaccgaggacgccgccgcgcgtgagggcatcgagctc
ggcgactacccggccggcgacgtgatcgccacgatgatcggtctcggtcggccctcgcgg
ctcaagggcgccggcttctacgactacgacgaggacggccggcgtacgacgctgtggccc
gggctcgccgagacgttccccgtcgccgagcagcagcccccgatccgcgacgtgcgcgac
cggatgctgttcatcgaggcgctcgagaccgcgaagtgcttcgaggagggcgtcatcacc
tccgccgccgcggccaacatcggctcgatcatgggcatcggcttcccggcgctcaccggc
ggcgccgcccagttcatgaccggctggcaggccctcgacgagaccggccacggcgtcggc
ccgatcggcctggacgccttcctggcccgcgccgacgagctcgccgaggcctacggcgag
cgcttccgccccacggcgtacctccgcgagctggcggcgagcggccggtccttccccgcc
tga
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