Nocardioides rotundus: K8W59_03140
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Entry
K8W59_03140 CDS
T07669
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
nro
Nocardioides rotundus
Pathway
nro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8W59_03140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_03140
Enzymes [BR:
nro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
K8W59_03140
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K8W59_03140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UAL30535
LinkDB
All DBs
Position
651727..652320
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AA seq
197 aa
AA seq
DB search
MPRFTRAELESFRDAEVPDLLPGPGGPPLRLLFVGINPGLWTAATQTHFAHPVNRFYPAL
LRAGIITEPVDPSAGMTEAERDHLRARGVGITNLVRRATAKASELTRAELRAGGEQLVRT
VAEQRPAVVAVAGITAYRTAFGRPKAMPGRQPEDLAGAELWVVPNPSGLNAHETVQSLAE
AYAAPARAAGIELAPVS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcttcacccgcgccgagctcgagtccttccgggacgccgaggtacccgacctg
ctgcccgggcccggcggcccgccgctgcggctgctcttcgtcgggatcaacccggggctg
tggaccgcggccacccagacgcacttcgcccacccggtgaaccggttctaccccgcgctg
ctgcgggccgggatcatcaccgagccggtggaccccagcgccgggatgaccgaggcggag
cgcgaccacctgcgggcgcgcggggtgggcatcaccaacctggtacggcgcgccaccgcg
aaggcgtccgagctcacccgcgccgagttgcgggccgggggcgagcagctggttcgcacg
gtcgccgagcagcgcccggcggtggtggccgtcgccgggatcacggcctaccgcaccgcg
ttcggccgccctaaggcgatgcccgggcggcagccggaggacctggcgggggccgagctg
tgggtggtgccgaacccgtcgggcctgaacgcgcacgagacggtgcagagcctggcggag
gcgtacgccgccccggcgcgcgccgcggggatcgagctggcgccggtcagctga
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