Nocardioides rotundus: K8W59_03220
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Entry
K8W59_03220 CDS
T07669
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nro
Nocardioides rotundus
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nro03016
]
K8W59_03220
Enzymes [BR:
nro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K8W59_03220
Transfer RNA biogenesis [BR:
nro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K8W59_03220
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF742
IF2_N
Motif
Other DBs
NCBI-ProteinID:
UAL30549
LinkDB
All DBs
Position
complement(671175..672437)
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AA seq
420 aa
AA seq
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MPDSEETPPEAERPQAPLLLLRDGLTDVVDTPEELTATATGLAAGSGPLAIDAERASGYR
YTNRAYLIQLRREGAGTSLIDPIAFDSVAEIQQATAGTEWILHAATQDLPCLREVGLRPT
SLFDTELAGRLLGYPRVGLATLVEELLGQRMRKEHSAVDWSTRPLPSPWLEYAALDVEVL
VELRDVLAAQLAEAGKEEWARQEFEHLLSFEPVVRKEAWRRTSGAHKVRGRRGLAAVREL
WLTRDRIAQQRDVAPGRIIPDSALVAAARAMPTSVRALIATDGFHGRGARRYGREWIAAL
DRAREMEEKELPSRAGGRSDGPPQPRVWAEKDPVAAARLTRARATVAELAEELNLPTENL
ITPDSLRRLLWEPPATRGEDLSQAVDAQLASYDVRPWQRELTVPLLVEAVLAAESEQQTD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactccgaggagaccccgcccgaggccgagcgcccccaggcccccctgctgctg
ctgcgcgacggcctcaccgacgtggtcgacacccccgaggagctcacggcgaccgcgacc
gggctggccgcgggctccgggccgctggcgatcgacgccgagagggcgtccggctaccgg
tacacgaaccgcgcctacctcatccagctgcgccgcgagggcgccggcacctccctgatc
gacccgatcgcgttcgattcggtcgcggagatccagcaggcgaccgcgggcacggagtgg
atcctgcacgccgccacccaggacctaccctgcctgcgcgaggtggggctgcggccgacc
agccttttcgacaccgagctcgccgggcgactgctcggctatccgcgggtcgggctggcc
accctggtcgaggagctgctcggccagcggatgcgcaaggagcactcggcggtggactgg
tcgacccggccgctgccctcgccctggttggagtacgccgccctcgacgtcgaggtgctg
gtcgagctgcgcgacgtgctcgccgcccagctcgccgaggccggcaaggaggagtgggca
cggcaggagttcgagcacctgctctccttcgagccggtggtgcgcaaggaggcgtggcgg
cgtacgtcgggcgcccacaaggtgcgcggccgccggggactggccgcggtgcgggagctg
tggctgacccgggaccggatcgcccagcagcgcgacgtggcccccggccggatcatcccc
gactccgcgctcgtcgccgcggcgcgggcgatgcccacctcggtgcgcgcgctgatcgcc
accgacggcttccacggacgcggagcgcgccgctacggccgcgagtggatcgccgccctg
gaccgggcgcgcgagatggaggagaaggagctccccagccgcgccggcgggcgcagcgac
ggtccgccccagccgcgggtctgggcggagaaggacccggtcgctgcggctcgcctcacc
cgtgcccgcgccacggtcgccgagctcgccgaggagctgaacctcccgacggagaacctg
atcacccccgacagcctgcggcgactgctctgggagccgcccgccacgcgcggggaggac
ctgagccaggccgtcgacgcccagctcgcgtcgtacgacgtgcgcccctggcagcgcgag
ctcaccgtgcccctgctcgtcgaggccgtcctggccgccgagtctgagcagcagacggat
tga
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