Nocardioides rotundus: K8W59_05520
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Entry
K8W59_05520 CDS
T07669
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nro
Nocardioides rotundus
Pathway
nro03030
DNA replication
nro03430
Mismatch repair
nro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8W59_05520
03430 Mismatch repair
K8W59_05520
03440 Homologous recombination
K8W59_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nro03032
]
K8W59_05520
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_05520
Enzymes [BR:
nro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8W59_05520
DNA replication proteins [BR:
nro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8W59_05520
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8W59_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
RNase_H_2
WelO5
DUF7508
XdhC_C
UVR
Motif
Other DBs
NCBI-ProteinID:
UAL30955
LinkDB
All DBs
Position
complement(1112801..1114576)
Genome browser
AA seq
591 aa
AA seq
DB search
MTAEAASTQWEAQRSFDELGRPLRDVTFTVVDLETTGGSASAGSMITEIGAVKVRGGEVL
GEFQTLVNPHTRIPPFIAVLTGITDSMVADSPGIDSALPAFLEFAAGTVLVAHNAPFDVG
FLQHFAREQGRPWPAFEVLDTARLARRVVTRDETPNCKLSSLARVFGSATTPNHRALADA
RATVDVLHGMMERLGGLGVHTLEELQTFSSRVSQQQRRKRHLAEALPHAPGVYLFRDDDD
RVLYIGTSRDLRTRVRSYFTASETRTRIGEMVGIASRVTGIECATPLEAEVRELRLIAEH
KPRYNRRSRFPEKVHFLKLTREVWPRLSLVRRVLDDDADYLGPFASKKAAERCLAALHDT
FPVRQCTGRLPREPSRSPCVLAEMGRCLSPCDGSADETTYSLLVRQLRDALLRDPDQVVT
AISTPMDALAGDERFEEAGVHRDRLAAFVRAAARTQRLSALTRCAEIVAARREDDGRWSV
HVVRHGRLAAAGVIPRGGDAHAYVAELVASAETVLPGLGPVPNASAEESERILRWLEQPG
VRLVDVDGEWVCPVGGAARHLALHDAVHQSRLSLVPFDERRSLSPVHQPTR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgaagcagcctcgacgcagtgggaggcccagcgctcgttcgacgagctgggc
cgcccgctgcgcgacgtgaccttcaccgtggtcgacctggagaccaccggcggctcggcc
tccgccggctcgatgatcaccgagatcggcgcggtcaaggtgcgcggcggcgaggtgctg
ggcgagttccagaccctggtcaacccccacacccgcatccccccgttcatcgcggtgctg
accggcatcaccgactcgatggtggccgactcccccggtatcgactccgcgctcccggcg
ttcctggagttcgccgccggcacggtcctggtcgcccacaacgcccccttcgacgtcggc
ttcctccagcacttcgcgcgcgagcagggccgcccctggccggccttcgaggtgctcgac
accgcgcggctcgcccgccgggtggtcacccgggacgagacccccaactgcaagctctcc
tcgctggcccgcgtgttcggctcggcgaccacccccaaccaccgggcactggccgacgcc
cgggccacggtcgacgtgctgcacgggatgatggagcggctcggcgggctgggcgtgcac
acgctggaggagctgcagaccttctcctcccgggtcagccagcagcagcgccgcaagcgg
cacctggccgaggccctcccgcacgccccgggggtctacctcttccgcgacgacgacgac
cgggtcctctacatcggcacctcgcgcgacctgcgcacccgcgtccggtcctacttcacc
gcctcggagacccgcacccggatcggcgagatggtcggcatcgcctcccgggtcacgggc
atcgagtgcgccacaccgctggaggccgaggtgcgcgagctccggctgatcgccgagcac
aagccgcgctacaaccggcggtcccgcttcccggagaaggtgcacttcctcaagctcacc
cgcgaggtgtggccgcgcctgtcgctggtgcggcgggtgctggacgacgacgccgactac
ctcggccccttcgcctcgaagaaggccgccgagcggtgcctggccgccctgcacgacacc
ttccccgtgcggcagtgcaccgggcggctgccccgggagccctcccgctcgccgtgcgtg
ctcgcggagatgggccgctgcctctccccgtgcgacggcagcgccgacgagacgacgtac
tccctcctggtgcgccagctccgcgacgcgctgctgcgcgaccccgaccaggtggtgacc
gccatctcgaccccgatggacgccctggccggcgacgagcgcttcgaggaggccggggtg
catcgcgaccggctggccgcgttcgtgcgcgccgccgcccggactcagcgactcagcgcc
ctcacccggtgcgccgagatcgtcgccgcccgccgggaggacgacggccgctggtcggtg
cacgtggtgcggcacggccggctcgcggccgccggggtgatcccccgcggcggggacgcg
cacgcctacgtcgccgagctggtcgccagcgcggagaccgtcctgcccggcctggggccg
gtgcccaacgcgtcggcggaggagagcgagcggatcctgcgctggctggagcagcccggc
gtccggctggtcgacgtcgacggcgagtgggtgtgcccggtgggcggtgccgcccggcac
ctcgcgctgcacgacgcggtgcaccagtcccggctcagcctggtgcccttcgacgagcga
cgctcgctctcgccggtccatcagcccacccgctga
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