Nocardioides rotundus: K8W59_05665
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Entry
K8W59_05665 CDS
T07669
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
nro
Nocardioides rotundus
Pathway
nro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8W59_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_05665
Enzymes [BR:
nro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
K8W59_05665
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K8W59_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UAL30981
LinkDB
All DBs
Position
complement(1140301..1141218)
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AA seq
305 aa
AA seq
DB search
MPAATTRNPVGTHVQVGKGLVKGALADADRLGCDTIQVFVGNPRGWALSKGDPAADEQFR
EQTRERGMRTFIHTPYLVNLGSPTAATYERSTALVAHNLRRAAEIGAEGVVVHTGSFVDS
SGDFGYDDAMAQVREALLPLLDAVSADDAPWVLLEPTAGQGRSLCAGVEDLVGYLDALEH
HPKAGICLDTCHVFAAGSPLDEPGGTAATLDRVVEIGGKGRLRLVHANDSMDVRGAFKDR
HQKIGEGHIGVEAFRELLAHPATEGVPLILETPGTRDSDDAQIALLQGIRDELHAGGDRT
KGRRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccacgacccgcaaccccgtggggacccacgtccaggtcgggaagggcctg
gtcaagggcgcgctcgccgacgccgaccggctcggctgcgacaccatccaggtcttcgtc
ggcaacccccgcggctgggcgctgagcaagggcgacccggcggcggacgagcagttccgc
gagcagacccgggagcgcgggatgcggacgttcatccacacgccgtacctggtgaacctc
ggctcgccgaccgccgcgacctacgagcgctcgaccgccctggtcgcgcacaacctgcgc
cgcgccgccgagatcggcgcggagggcgtggtcgtgcacaccgggtcgttcgtcgacagc
tccggcgacttcgggtacgacgacgcgatggcccaggttcgcgaggcgctgctgcccctc
ctcgacgcggtctcagccgacgacgccccgtgggtgctgctcgagccgaccgccgggcag
ggccgcagcctgtgcgcgggcgtggaggacctcgtgggctacctggacgccctggagcac
caccccaaggccgggatctgcctcgacacctgccacgtcttcgccgcgggctctcccctg
gacgagccgggaggtacggcggccacgctggaccgggtcgtcgagatcggtgggaagggc
cggctgcggctggtgcacgccaacgactcgatggacgtgcgcggcgccttcaaggaccgg
caccagaagatcggcgagggccacatcggcgtcgaggccttccgcgagctgctcgcgcac
ccggcgaccgagggcgtgcccctcatcttggagacccccggcacccgggacagcgacgac
gcccagatcgccctcctccagggcatccgcgacgagctgcacgcgggaggcgaccgcacg
aaggggcgccgacggtga
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