Nocardioides rotundus: K8W59_12725
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Entry
K8W59_12725 CDS
T07669
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nro
Nocardioides rotundus
Pathway
nro03420
Nucleotide excision repair
nro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8W59_12725 (pcrA)
03430 Mismatch repair
K8W59_12725 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_12725 (pcrA)
Enzymes [BR:
nro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8W59_12725 (pcrA)
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8W59_12725 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K8W59_12725 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
AAA_16
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
UAL28719
LinkDB
All DBs
Position
complement(2587370..2589787)
Genome browser
AA seq
805 aa
AA seq
DB search
MSSTFPIPGLESTPEPAREERRGPTRDQLLEGLNEPQRAAVTHEGTPLLVVAGAGSGKTR
VLTRRIAWLVSERKAHPGSILAITFTNKAAAEMKERVEALVGRRARVMWVSTFHSACVRI
LRKEIDRLGYSSNFTIYDAADSKRLMGLVCRDLDLDVKKFPPNAVLHWVSDAKNELRDHE
EAARDAQNGLEETYASAYSLYQRRLREANALDFDDLIMLTVHLFQAFPEVRETYRRRFRH
VLVDEYQDTNHAQYALVHQLCGEQMEDGDGERVPPSELMVVGDADQSIYAFRGANIRNIL
DFEADFPDATTILLEQNYRSTQTILTAANAVIGNNRGRKPKSLWSAAGDGAKIVGYVADD
ERDEARFVSGEIDRLTDEGAARPGDVAVFYRTNNQSRVFEEVFIRLGMPYRVVGGVRFYE
RKEIKDALAYLRALVNPADEISLRRILNTPKRGIGDRAEAVVAAYAERERITFFDALRRA
EEAPGIATRSLKQIRGFVAMMEELRTMVEADERADVILESVLDRSGMLAELEASDDVQDG
TRVENLAELVAVAREFSDDPVAGPSADPADVDAGQVAPGLGDFLERVALVADADQIPDAP
SESDGGMVTLMTLHTAKGLEFPVVFLTGLEDGVFPHSRSLGDQPELEEERRLAYVGLTRA
EQRLYISRALMRSAWGAPMHNPASRFLSELPVDLVDWRREESAQTRWGRPDVASSSGASS
GMGSLTAAGRRNFTSAALRADAESKAKKSRPVPSLEPGDRVSHDSFGLGTVVSLEGQGDK
QVASIDFGSGGVRRLLLRYAPVEKL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacgttcccgatccccggccttgagtccaccccggagcccgcccgggaggag
cgtcgcggaccgacccgcgaccagctcctcgaggggctcaacgagccgcagcgagccgcg
gtcacccacgagggcacgcccctgctcgtggtcgccggcgccggctcgggcaagacccgg
gtgctgacccgccggatcgcctggctggtcagcgagcgcaaggcccaccccggctcgatc
ctggccatcaccttcaccaacaaggccgccgcggagatgaaggagcgggtcgaggcgctg
gtgggtcgccgggcgcgggtgatgtgggtgagcaccttccactccgcgtgcgtgcgcatc
ctgcgcaaggagatcgacaggctcggctactcctcgaacttcacgatctacgacgccgcc
gactccaagcggctgatgggcctggtctgccgcgacctggacctggacgtgaagaagttc
ccgccgaacgcggtgctgcactgggtctccgacgccaagaacgagctgcgcgaccacgag
gaggcggcccgggacgcgcagaacggcctggaggagacctacgcgtcggcgtactcgctc
tatcagcgccgcctgcgcgaggccaacgcgctggacttcgacgacctgatcatgctcacc
gtgcacctgttccaggcgttcccggaggtgcgcgagacctaccgccgccggttccggcac
gtgctggtcgacgagtaccaggacaccaaccacgcgcagtacgccctggtccaccagctc
tgcggcgagcagatggaggacggcgacggcgagcgggtgccgccgagcgagctgatggtg
gtcggcgacgccgaccagtcgatctacgccttccgcggggccaacatccgcaacatcctc
gacttcgaggccgacttccccgacgcgacgacgatcctgctcgagcagaactaccgctcg
acccagacgatcctcaccgcggccaacgcggtgatcggcaacaaccggggccggaagccg
aagagcctgtggtcggccgccggggacggcgcgaagatcgtgggctacgtcgccgacgac
gagcgcgacgaggcccgcttcgtgtccggggagatcgaccggctcaccgacgagggcgcg
gcccgcccgggcgacgtggcggtgttctaccggaccaacaaccagtcccgcgtcttcgag
gaggtcttcatccgcctcggcatgccctatcgggtcgtcggcggcgtgcgcttctatgag
cgcaaggagatcaaggacgcgctggcctacctgcgcgcgctggtcaacccggccgacgag
atctcgctgcggcggatcctcaacacccccaagcgggggatcggcgaccgggcggaggcc
gtcgtggcggcgtacgccgaacgcgagcggatcacgttcttcgacgcgctgcgccgggcc
gaggaggctcccggcatcgcgacccgcagcctgaagcagatccgcggcttcgtcgcgatg
atggaggagcttcggacgatggtggaggccgacgagcgggccgacgtgatcttggagagc
gtgctggaccgctccgggatgttggccgagctcgaggcctccgacgacgtccaggacggc
acccgggtggagaacctcgccgagctcgtggcggtggcgcgggagttctccgacgacccc
gtggccggtccgtcggcggaccccgccgacgtcgacgcgggccaggtcgcccccgggctc
ggggacttcctcgagagggtggccctggtggccgacgccgaccagatccccgacgccccg
agcgagagcgacggcggcatggtcaccctgatgacgctgcatacggccaaggggctggag
ttccccgtggtcttcctcaccggtttggaggacggcgtgttcccgcactcccggtcgctg
ggggaccagcccgagctggaggaggagcggcggctggcgtacgtcggcctcacccgcgcc
gagcagcggctctacatctcccgtgccctgatgcgctcggcctggggtgcgcccatgcac
aacccggcctcccgcttcctctccgagctgccggtcgacctggtcgactggcgccgggag
gagtcggcccagacccgctgggggcggccggacgtcgcgagctcctcgggggcctcgagc
gggatgggctcgctcaccgccgccggccggcgcaacttcacctcggccgcgctgcgggcc
gatgcggagtcgaaggcgaagaagtcccgcccggtgccctccctggagcccggcgaccgg
gtctcccacgactccttcggcctcgggaccgtggtctcgctggaggggcagggcgacaag
caggtcgcctcgatcgacttcggctccggcggcgtacgccggctgctgctgcgctacgcg
cctgtcgagaagctctga
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