Nocardioides rotundus: K8W59_13175
Help
Entry
K8W59_13175 CDS
T07669
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nro
Nocardioides rotundus
Pathway
nro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8W59_13175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nro03019
]
K8W59_13175
03016 Transfer RNA biogenesis [BR:
nro03016
]
K8W59_13175
Enzymes [BR:
nro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K8W59_13175
Messenger RNA biogenesis [BR:
nro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K8W59_13175
Transfer RNA biogenesis [BR:
nro03016
]
Prokaryotic type
tRNA degradation factors
K8W59_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
PCB_OB
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
UAL28781
LinkDB
All DBs
Position
complement(2672044..2674281)
Genome browser
AA seq
745 aa
AA seq
DB search
MSEPTISAVETVLDNGTFGQRKVKFETGLLARQAAGSVTAYLDDDTMLLSATTASKQPKD
HFDFFPLTVDVEERMYAIGQIPGSFFRSEGRPGEDAILTCRLIDRPLRPTFKKGLRNEVQ
VVITVLALDQNMPYDVLAINAASMSTQLSGLPFSGPIGGVRMALIDGQWVAFPTHEQLES
AVFDMVVAGRVTETGDVAIMMVEAEATEQTVELVRGGQQAPTEEVVAGGLDAAKPFIKQL
VEAQQQLAAEAAKPVEEFPVFLEFEDDVYNAVESSAKDDTASALTIAGKQEREERLDEIK
AGLVERHAADFEGREKEIGAAFRALTKSLVRDRVLREKVRIDGRGLADIRPLHAEVGVLP
RVHGSALFERGETQILGVTTLDMLKMEQQLDTLSPEKHRRYMHKYVFPPFSTGETGRVGS
PKRREVGHGALARRALLPVLPDREEFPYAIRQLSEAMGSNGSTSMGSVCASTLSLLQAGV
PLKAPVAGIAMGLISGEVDGKTEYVALTDILGAEDAFGDMDFKVAGTREFVTALQLDTKL
DGIPAEVLGQALTQARDARMTILDVMAEAIDAPEEMSMHAPRIITVMVPVDKIGEVIGPK
GKVINQIQDDTGASVSIEDDGTVYIGATSGEAAEAAKAAVNAIANPTMPEVGERYLGTVV
KTTNFGAFVSLLPGKDGLLHISKLRALASGKRVEAVEDVVSVGQKVQVEIAEIDDRGKLS
LVPVVEESETSEASDEAPAEVTEAQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacccaccatctccgctgtcgagaccgttctcgacaacggcaccttcggccag
cgcaaggtcaagttcgagaccggcctcctggcccgtcaggccgccggctccgtgacggcg
tacctcgacgacgacaccatgctgctctcggccacgacggcctccaagcagcccaaggac
cacttcgacttcttcccgctgacggtcgacgtcgaggagcggatgtacgcgatcgggcag
atccccggctcgttcttccgctccgagggtcgcccgggcgaggacgcgatcctcacctgc
cggctgatcgaccgccccctgcgcccgaccttcaagaagggcctgcgcaacgaggtccag
gtcgtcatcaccgtgctggcgctggaccagaacatgccctacgacgtgctggcgatcaac
gccgcgtcgatgtccacccagctgtccggcctgccgttctccggcccgatcggcggcgtg
cggatggcgctgatcgacggccagtgggtcgcgttcccgacccacgagcagctcgagtcg
gccgtcttcgacatggtcgtggccggccgggtgaccgagaccggcgacgtcgcgatcatg
atggtcgaggccgaggccaccgagcagaccgtcgagctggtccgcggtggccagcaggcc
ccgaccgaggaggtcgtggcgggcggcctggacgccgccaagccgttcatcaagcagctg
gtcgaggcccagcagcagctcgccgccgaggccgccaagccggtcgaggagttcccggtc
ttcctggagttcgaggacgacgtctacaacgccgtcgagtcctccgcgaaggacgacacc
gcgtccgccctcaccatcgccggcaagcaggagcgcgaggagcgcctcgacgagatcaag
gccgggctggtcgagcggcacgccgccgacttcgagggtcgggagaaggagatcggcgcc
gcgttccgcgcgctgaccaagtcgctggtgcgcgaccgcgtgctgcgcgagaaggtccgt
atcgacggccgcggcctggccgacatccgtccgctgcacgccgaggtcggcgtgctcccg
cgggtgcacggctcggcgctgttcgagcgcggcgagacccagatcctgggtgtcaccacg
ctggacatgctgaagatggagcagcagctggacacgctctccccggagaagcaccgccgc
tacatgcacaagtacgtcttcccgccgttctccaccggtgagaccggccgggtcggctcg
cccaagcgccgcgaggtcggccacggcgcgctcgcccgccgggcgctgctgccggtgctg
ccggaccgcgaggagttcccctacgcgatccgccagctgtcggaggcgatgggctccaac
ggctccacctcgatgggctcggtctgcgcctcgacgctgtcgctgctgcaggccggcgtg
cccctcaaggcgccggtggccggcatcgcgatgggcctcatctccggcgaggtcgacggc
aagaccgagtacgtcgcgctgaccgacatcctcggcgccgaggacgccttcggcgacatg
gacttcaaggtcgccggcacccgtgagttcgtcaccgcgctccagctcgacaccaagctc
gacggcatccccgccgaggtgctcggccaggcgctcacccaggcccgcgacgcccggatg
acgatcctggacgtgatggccgaggcgatcgacgctccggaggagatgtcgatgcacgcg
ccgcggatcatcaccgtgatggtgcccgtcgacaagatcggcgaggtcatcggccccaag
ggcaaggtgatcaaccagatccaggacgacacgggcgcgagcgtctcgatcgaggacgac
ggcaccgtctacatcggcgccaccagcggcgaggccgccgaggccgccaaggccgccgtc
aacgcgatcgccaacccgacgatgcccgaggtcggcgagcgctacctcggcaccgtggtc
aagacgacgaacttcggtgcgttcgtctcgctgctgcccggcaaggacggcctgctgcac
atcagcaagctgcgcgccctggccagcggcaagcgggtcgaggccgtcgaggacgtcgtc
tccgtgggccagaaggtccaggtcgagatcgccgagatcgacgaccgcggcaagctgtcg
ctggtcccggtggtcgaggagtccgagacctcggaggcctccgatgaggctcccgcggag
gtcacggaggcgcagtga
DBGET
integrated database retrieval system
