Nocardioides rotundus: K8W59_13260
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Entry
K8W59_13260 CDS
T07669
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nro
Nocardioides rotundus
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nro03016
]
K8W59_13260 (truB)
Enzymes [BR:
nro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K8W59_13260 (truB)
Transfer RNA biogenesis [BR:
nro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K8W59_13260 (truB)
Prokaryotic type
K8W59_13260 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Phage_tudor
Motif
Other DBs
NCBI-ProteinID:
UAL32011
LinkDB
All DBs
Position
complement(2693014..2693874)
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AA seq
286 aa
AA seq
DB search
MPGLVVVDKPSGMTSHDVVSRGRRLLGTRKVGHAGTLDPMATGVLVLGVGRATRLLGHLT
LTDKAYDATIRLGASTTTDDAEGEVTATADTSGLDPADVERALERFVGDIEQVPTSVSAV
KVEGKRAYQRVREGEEVRLDARPVTVHELTLHEQRPGERFELDVSLRCSSGTYVRAIARD
LGAALGVGGHLTALRRTAVGPFGLDRARTLDDLAEDPVVVPLAEAAREGFAAVDLDDAQA
RDVGFGRPLDLRLEGLSALFAPDGTFLALYRPDPAGGARPVAVFVG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggctggtggtggtcgacaagccctcgggcatgacgtcgcatgacgtcgtgtcc
cgagggcgtcggctgctggggacgcgcaaggtcgggcacgccggcaccctggacccgatg
gccaccggtgtgctcgtgctgggcgtcgggcgggccacccggctgctggggcacctgacc
ctgaccgacaaggcgtacgacgccacgatccggctgggcgcgtcgacgaccaccgacgac
gccgagggcgaggtgaccgccacggcggacacctccgggctcgaccccgcggacgtcgag
cgggcgctggagcgcttcgtcggcgacatcgagcaggtcccgacctcggtgtcggcggtc
aaggtcgagggcaagcgcgcgtaccagcgggtgcgcgagggcgaggaggtccggctcgac
gcccgcccggtgaccgtgcacgagttgacgctgcacgagcagcggccgggggagcgcttc
gagctggacgtctcgctgcgctgctccagcggcacctacgtccgcgcgatcgcccgcgac
ctcggtgcggcgctgggcgtgggcggccacctgacggcgctgcgccgtaccgccgtcggg
ccgttcggcctggaccgcgcgcgcaccctggacgacctggccgaggacccggtcgtggtc
ccgctcgccgaggcggcgcgcgagggcttcgccgcggtcgacctggacgacgcccaggcc
cgcgacgtcggcttcggccggccgctggacctgcgcctggaggggctgagcgcgctcttc
gcccccgacggcaccttcctcgcgctctaccgtcccgacccggccggcggcgcgcgaccg
gtggcggtcttcgtcggctga
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