Nocardioides rotundus: K8W59_13630
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Entry
K8W59_13630 CDS
T07669
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nro
Nocardioides rotundus
Pathway
nro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8W59_13630 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_13630 (mutM)
Enzymes [BR:
nro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K8W59_13630 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K8W59_13630 (mutM)
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K8W59_13630 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Mcm2-like_OB_arc
Auto_anti-p27
DUF7573
DUF2267
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UAL28853
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All DBs
Position
complement(2770002..2770883)
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AA seq
293 aa
AA seq
DB search
MPELPEVEVVRRGLEAHVVGHTIGSVDVLHPRPVRRDPRGPAGFAEALTGRDVLAARRRG
KYLWLALDGEDAMLGHLGMSGQLLVQPVDAPAERHLRVRLALSGGRELRFVDQRMFGGLS
FSPGGAELPAEIAHIARDPLDPLFDDDAFVARVRRRPVAIKRQLLDQNLVSGVGNIYADE
ALWRTRLHGERLGERLTRGQVVELLGHVREVMTDALAQGGTSFDSLYVNVNGESGYFDRS
LHAYGNEGEPCERCGTPIRRVAFMNRSSYFCPVCQPVPRKRRTAARRPLPSAD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtccggcgcggcctcgaggcccacgtcgtgggc
cacaccatcggctccgtcgacgtgctccacccccgtccggtgcgccgcgacccccgcggg
cccgccgggttcgccgaggcgctgaccggccgcgacgtgctggcggcccggcgccgaggc
aagtacctctggctcgcgctcgacggcgaggacgcgatgctcggccacctcgggatgagc
gggcagctgctcgtccagcccgtcgacgcgcccgcggagcggcacctgcgggtccgcctc
gccctgtccggtgggcgcgagctgcgcttcgtcgaccagcggatgttcggcgggctctcc
ttctccccgggcggcgccgagctgcccgcggagatcgcgcacatcgcccgcgaccccctc
gacccgctcttcgacgacgacgccttcgtcgcccgggtccgccggcggccggtggcgatc
aagcgccagctgctggaccagaacctggtcagcggggtcggcaacatctacgccgacgag
gcgctgtggcgaacccggctccacggggagcggctgggggagaggctgacccggggccag
gtcgtcgagctgcttggccacgtgcgcgaggtgatgaccgacgcgctcgcccagggcggc
acgtccttcgactcgctctatgtcaacgtcaacggggagtcgggctacttcgaccggtcc
ctgcacgcctacggcaacgagggcgagccgtgcgagcggtgcggtacgccgatccgacgg
gtcgccttcatgaaccggtcgtcgtacttctgcccggtctgccagccggtcccgcggaag
cgccgtacggcggcccggagacccctcccgtcggcggattga
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