Nocardioides rotundus: K8W59_13740
Help
Entry
K8W59_13740 CDS
T07669
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nro
Nocardioides rotundus
Pathway
nro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8W59_13740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nro03000
]
K8W59_13740
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_13740
Enzymes [BR:
nro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
K8W59_13740
Transcription factors [BR:
nro03000
]
Prokaryotic type
Helix-turn-helix
AraC family
K8W59_13740
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K8W59_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF7437
Motif
Other DBs
NCBI-ProteinID:
UAL28873
LinkDB
All DBs
Position
complement(2788633..2790126)
Genome browser
AA seq
497 aa
AA seq
DB search
MTTTRHLDAESCYRAVKSRDRRFDGVFYTAVHTTGIYCRPSCPARTPALRNVSFHPTAAA
AQAAGFRACKRCLPDATPGSPEWDVAADVAGRAMHLISDGLVDRDGVEGLAAAVGYTPRH
LTRVLTAELGAGPLALARARRAQTARVLIETSELAFADVAFASGFASVRQFNDTVREVYA
ASPSQLRGRPGCRGRGAVTPGELELRIAVRTPFDGRALLRFLAVHAVPGVEAVEGNRYLR
TMSLPHGTGVLDVTLTDLPAPGAGTLPVRLHLADLRDTGTAVTRVRRLLDADSDPTAVTG
AFTGDPVLGPLRRRRPGLRVPRGVDPDETAVRTVVGQQVSVAGARTVTARLVREYGDPVE
TGHPALTHLFPSAGSLASVDPAELPMPRSRGRALVGLAAALADGRVDLAGGADRDEARAA
LLGLAGIGPWTADVIALRALGHPDVFLPTDLAVRSVLAGMGLSGRPEEVAEAWRPWRSYA
LVHLWTTLTMLDPDKEQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacccggcacctggacgcggagagctgctaccgcgccgtgaagagccgggac
cgccgcttcgacggggtcttctacaccgccgtccacaccaccggcatctactgccggccc
tcgtgccccgcgcggactcccgcgctgcgcaacgtcagcttccaccccaccgccgcggcc
gcccaggccgcaggcttccgcgcctgcaagcgctgtctgcccgatgccaccccgggctcg
cccgagtgggacgtcgcggccgacgtggccggccgggccatgcatctcatctccgacggc
ctggtcgaccgggacggcgtcgagggcctcgcggcggcggtcggctacacaccgcggcat
ctgacccgggtgctcaccgccgagctcggcgccggtccgctcgccctcgcccgggcccgc
cgcgcgcagaccgcgcgggtgctgatcgagacctccgagctcgccttcgccgacgtggcc
ttcgcctccgggttcgccagtgtccgccagttcaacgacaccgtgcgcgaggtctacgcc
gcgtcgccgagccagctgcgcggccgtcccggctgtcgggggaggggcgccgtgacgccc
ggcgagctcgagctccggatcgccgtacgcacccccttcgacggccgggccctcctgcgg
ttcctcgccgtgcatgccgtccccggtgtcgaggccgtcgagggcaaccgctacctgcgc
acgatgagcctgccccacggcacgggcgtcctcgacgtcacgctcaccgacctgcccgcg
cccggagccggcaccctcccggtgcggctacacctggcggacctgcgcgacacgggcacc
gccgtcacgcgggtacggcggctcctggatgccgacagcgacccgaccgcggtgaccggg
gccttcaccggcgacccggtcctcgggcccctgcggcgccgccgtcccggcctgcgcgtg
ccgcgaggcgtcgaccccgacgagaccgccgtccgcaccgtcgtcggccagcaggtcagc
gtcgccggcgcccggacggtcaccgcacgcctggtgcgggagtacggcgaccccgtggag
accgggcacccggcgctcacccacctcttcccgtcggcgggcagcctggcgtccgtcgac
ccggcggagctgccgatgccgcgctcccgcgggcgcgccctggtcggcctcgccgccgcg
ctggccgacggccgggtcgacctcgcgggcggcgcggaccgcgacgaggcccgcgccgcg
ctcctcggcctggcggggatcgggccctggaccgccgacgtcatcgcgctgcgcgcgctc
gggcaccccgacgtcttcctgcccaccgacctcgccgtgcgctccgtgctcgccggcatg
gggctgtccggcagaccggaggaggtcgccgaggcctggcggccctggcgctcctacgcg
ctggtgcacctgtggaccaccctgaccatgctcgacccggacaaggagcagtga
DBGET
integrated database retrieval system
