Nocardioides rotundus: K8W59_17850
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Entry
K8W59_17850 CDS
T07669
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nro
Nocardioides rotundus
Pathway
nro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K8W59_17850 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_17850 (recD)
Enzymes [BR:
nro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K8W59_17850 (recD)
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8W59_17850 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
AAA_22
Helicase_RecD
UvrD-helicase
SH3_13
PhoH
AAA_16
TrwB_AAD_bind
TraI_hel_assoc_N
Herpes_Helicase
AAA_28
nSTAND3
AAA
MukB
AAA_29
NTPase_1
NACHT
DO-GTPase1
DEAD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UAL29585
LinkDB
All DBs
Position
complement(3604871..3606664)
Genome browser
AA seq
597 aa
AA seq
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MSELWEPADTFDARLALSVDGRLHTANEAGVLTSADVHVARTLAQLTGETDEDVLLAAAL
TVRAVRAGSVCLDLATVGDIPLPEGAEIAWPETADWAAAVADSRLVAAGVLRWEHDLLYL
DRYHEQESQVLDDLVERTRSQPAYDDARITAALDRILAAPGFAEQAEACARAARQWTTVL
TGGPGTGKTTAVAALLATLRDAQPDGAPLRVALTAPTGKASARLRESVRDAAAPPRPDAV
APEFSDDERAWLSGLEAMTLHRLLRRDPGNTTRFRHHRGNRLPHDVVVVDETSMVSLTMM
ARLLEAVRPDCRLVLVGDPDQLASVEAGAVLGDLVEGYSGRDDSPVAALSTTHRFGEHIG
ALATALRDGDADAALAVLAAGHDEVVWVREEDPSVVVRNATLPAALAVRSAAERGDAEGA
LAALDRHRLLCAHRDGPFGVRHWNRRVESWLAAETGDPLYERYYLGRPLLVTANDYALGV
LNGDTGVVVAASGSGVDGVGRVAMRDTDGLRFLAPSRLGEVDTMHAMTIHKSQGSQVDEV
TVLLPDEESRLLTRELFYTAVTRARHRVRVVGAESAVRAAVERQARRASGLAARLRG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctgtgggagcccgccgacaccttcgacgcccggttggcgctgagcgtggac
ggccggctgcacacggcgaacgaggccggggtgctgaccagcgccgacgtgcacgtcgcc
cgcaccctggcgcagctgacgggggagaccgacgaggacgtgctcctggccgcggcgctc
accgtgcgggcggtgcgagccgggtcggtgtgcctggacctcgccaccgtcggcgacatc
ccgctcccggagggcgcggagatcgcgtggccggagacggcggactgggccgccgcggtc
gccgacagtcggctggtggcggcgggcgtgctgcgctgggagcacgacctgctctacctc
gaccgctaccacgagcaggagagccaggtgctcgacgacctcgtggagcgcacccgctcg
cagccggcgtacgacgacgcgcggatcaccgccgctctcgatcggatcctcgccgccccc
ggcttcgccgagcaggccgaggcgtgcgcccgcgccgcgcggcagtggaccaccgtgctc
accggcggccccggcacgggcaagaccaccgcggtggcggccctgctggcgaccctgcgc
gatgcgcagcccgacggggcgccgctccgggtcgcgctgaccgcgcccaccggcaaggcc
tcggcccggttgcgggagtcggtgcgggacgccgccgcgccgccgcgaccggatgcggtc
gcccccgagttcagcgacgacgagcgcgcctggctctccgggctcgaggcgatgacgctg
caccgtctgctgcggcgcgaccccggcaacaccacccgcttccgccaccaccgcggcaac
cggctgccgcacgacgtggtcgtcgtcgacgagacctcgatggtctcgctgaccatgatg
gcccggctactggaggcggtgcggcccgactgccggctggtgctcgtgggcgaccccgac
cagctcgcctcggtcgaggcgggcgcggtgctcggcgacctggtcgaggggtactccggc
cgtgacgactcgccggtcgccgcgctcagcaccacccaccgcttcggcgagcacatcggc
gcgctggccaccgcgctgcgcgacggcgacgccgacgccgccctggccgtgctggcggcc
gggcacgacgaggtcgtctgggtccgggaggaggacccctcggtcgtggtgcggaacgcg
accctgcccgcggccctggccgtccgctccgcggcggagcgcggcgatgccgagggcgcg
ctggccgcgttggaccgacaccggctgctgtgcgcccaccgcgacggcccgttcggtgtc
cgtcactggaaccgccgcgtcgagtcctggctggccgccgagaccggtgacccgctctac
gagcgctactacctgggccgcccgctgctggtgaccgccaacgactacgccctcggcgtg
ctcaacggcgacaccggcgtggtcgtggcggcttccggctccggtgtcgacggggtcggt
cgggtcgcgatgcgcgacactgacgggctccggttcctcgctccctcccggctcggcgag
gtcgacacgatgcacgcgatgacgatccacaagagccagggcagccaggtcgacgaggtc
accgtgctcctgcccgatgaggagtcgcggttgctgacccgcgagctcttctacaccgcg
gtcacccgggcccggcaccgggtgcgcgtcgtcggtgccgagtccgccgtacgtgccgct
gtcgagcgtcaggcccgccgcgcctccggcctcgccgcccgcctgcgcggctga
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