KEGG   Nocardioides rotundus: K8W59_18085
Entry
K8W59_18085       CDS       T07669                                 
Symbol
cas3u
Name
(GenBank) type I-U CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
nro  Nocardioides rotundus
Brite
KEGG Orthology (KO) [BR:nro00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nro02048]
    K8W59_18085 (cas3u)
Enzymes [BR:nro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K8W59_18085 (cas3u)
Prokaryotic defense system [BR:nro02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    K8W59_18085 (cas3u)
SSDB
Motif
Pfam: Cas3-like_C_2 Cas3_HD ResIII Helicase_C DEAD
Other DBs
NCBI-ProteinID: UAL29625
LinkDB
Position
complement(3658641..3661580)
AA seq 979 aa
MRGEDFVEFYREIHGHEPFDWQRQLVLDVIEHGSWPALVDAPTGMGKTALLDIAVFLTAV
DTDAPARTRLGRRRVFFVVDRRIVVDQAHERAQRISTALDAASEHGVVGEVARRLVALGP
QRGPDSPHPTLSVVKMRGGTTWDAAWVPRPDLPAIVSGTVDQVGSRLFFRGYGVSKRRWP
IDAALVGTDSLILVDEAHLASALVTSLDSALGYDATQAEMHLPAPAVVHLSATAGDQPQG
WTSTFDTEAHLADPEAARRLQAPKTLQVESTTKQAAVRSLAGAAAHEAVEDARVLVVCNT
IDRARAVHAELRKRLDPATALSLLIGRSRPLDRERVQDDVLTWFGADRHDAPGAAVLVAT
QTVEVGIDLDATALVTESASWDALVQRIGRVNRRGRSPESRVLVVHDDDPKNPVYGEVRG
RTVEFLMQIADSDGQVDVSPLALRGLASRARETGGFLPAPIIPVLLPAHLDAWTRTAPPP
TNDAPLDAYLHGLNHGLAPVTLTWRDGLVDPSGEPVSGREADAVISAVPVRSEESIEVPL
AALRRWLVQSKPEPLGEWDDEDDWEVPFQEESDRPVVRRSPQGDGTDTWTWAFAQDLRPG
DSVVIPTEWGGLDEFGWSPMSTEKVIDVAELAAFVRGRPVLRLDQGLPARLGLTPPPAEL
WEKVWRWRNAEERDAEQDLRDDVESEVRVWLETANLSRPEPWARGERLMGLRDAMNSASL
QVPATQVRRPGNAGTARPDDEQLMLVPQALLRGDWSGAWRDVNEESADGTVHLRGPVSLT
DHLRDVGERAAEIVQSLGLSEDLSRVVTDAARWHDLGKVDPRFQAMLFGGDPIRAALADE
PRAKSGMPPGDLQQQRDARRRSGLPRRARHEAWSAALVEAFVAAMPDGYAGDAELLIHLV
GSHHGHGRPLMPIVVDGGHHQLVAHVDGLGEVTAELPKQVDLPAAERFARLNRRYGRWGL
ALLETIVRSADTTISGEGR
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgcgtggcgaggacttcgtcgagttctaccgagagatccacggtcacgagccctttgac
tggcagcggcaactcgtgttggacgtcatcgagcacggctcgtggcctgcactggtggat
gctcccaccggcatgggcaagactgcgctgctggatatcgcggtcttcttgaccgcggtc
gacaccgacgccccggctcgcacgcgtctgggccggcgacgggtgttcttcgtcgtcgac
cggcggatcgtcgtcgatcaagcccatgagcgggcccagcgaatctccacagcgctagat
gcggccagtgagcacggggttgtcggcgaggtcgcccggcgactggtggcgctggggccg
cagcgagggcccgacagcccccaccccactctctctgtcgtcaagatgcgtggcgggacc
acgtgggacgcggcatgggtgccccgccccgacctgccggcgatcgtctccggcaccgtc
gatcaggttggtagtcgcctcttcttccgcgggtatggggtcagcaagcgacgctggccg
atcgacgcggctctggtgggaacggactccttgatcctggtggacgaagcccacctggcc
agcgcgctggtgaccagtctggactcggcgctcgggtacgacgcgacccaagcggagatg
cacctgccagctcctgccgtggtgcacctctcggccaccgcgggggatcaacctcagggg
tggacgtcgaccttcgacaccgaggcgcacctggctgatcccgaggccgcccggcggctc
caagcccccaagacgcttcaggtggaatcgacgaccaaacaggcagcggtcaggagtctg
gcgggcgcagctgctcatgaggctgtcgaggatgctcgagtgctcgtcgtctgcaacacc
atcgatcgggcgcgggcagtgcatgcggaattgcgcaagcgtctcgacccagcaactgct
ctgtcgctcctcatcggacgcagccgccccctggaccgcgaaagagtccaggacgacgta
ctcacctggttcggcgccgatcgccatgacgcgcccggtgcggcggtgctggttgcgacg
cagaccgtggaggtcgggatcgacttggacgccaccgccctggtcaccgagagtgcctca
tgggacgcgctcgtccaacggatcgggcgggtgaacaggcggggtcggtcacctgagtcc
cgagtcttagtcgtccacgacgacgaccccaagaacccggtctatggcgaggtgcggggt
cgcacagtcgagttcttgatgcagattgcagactccgatgggcaggtcgacgtatcgccg
ctggctctgcgcggtttggcgtctcgcgcccgtgaaaccgggggatttctccccgcgccg
atcattcccgtcctcttacccgcccaccttgatgcgtggacccgcaccgccccaccaccg
acgaatgatgctccgttggacgcatacctacacggcctgaaccatggcttggcgccggtg
acgctgacctggcgggacgggctcgtcgatccgagcggggagccggtctcggggcgagag
gcggacgcagtgatcagcgcggtgcccgtcaggtccgaagagtcgatcgaggtgcccctg
gcggctcttcgccggtggctcgtacagagcaagcccgaaccgttgggcgagtgggacgac
gaggacgattgggaggtcccctttcaggaggagtcggatcgtccggtcgtccgcaggtct
cctcagggcgacggaaccgatacgtggacctgggccttcgctcaggatcttcgtcctggc
gacagcgtggtcataccgaccgaatggggcggactggacgagttcgggtggtcgcccatg
agcaccgagaaggtcatcgacgtcgccgagctggctgccttcgtccgaggccgccccgtg
ctgagactggaccagggactcccagctcgactcgggttgacgccgcccccggccgagctg
tgggagaaggtgtggcggtggcgcaatgcggaggaacgcgacgcagagcaggacttgcga
gacgacgtggaatccgaagttcgggtctggctggagacggccaacctgtcacggccagag
ccgtgggctcgcggtgagcgactgatgggcctgagagacgcgatgaattcggcgtcgctg
caggtcccagcgacacaggtccgccgacccgggaatgccgggacggccaggccggacgat
gagcagctgatgctcgtcccgcaggcgctactacgtggagattggtcgggcgcctggcga
gacgtcaacgaggagtcggcggacggcaccgttcacctacgcggcccggtgagcttgacc
gatcaccttcgagacgtcggcgagcgggctgcggagatcgtgcagtcgcttggactgagc
gaggacctcagtcgagtcgtgaccgacgcggcccggtggcacgacctgggcaaagtggat
ccgcgattccaggccatgctgttcggcggtgacccgatcagagccgcgttggcagatgag
cctcgtgccaagtctggaatgccccccggggatctgcaacagcagcgtgacgctcgccga
cgaagcggactcccgaggcgagcccggcatgaggcctggtccgctgccttggtggaggca
ttcgtcgctgctatgccggatgggtatgccggtgatgccgagctcctgattcacctcgtc
ggcagccaccacggtcatggacgtccgttgatgcccatcgtcgtcgatggcggtcatcat
cagttggtcgcccacgtcgacggtctcggcgaagtgaccgctgagctgcccaagcaggtg
gacctgcccgctgcagagcgctttgctcgcctgaatcggcggtatggccgatggggctta
gccctgctcgagacgattgtgcgctccgcggacacgacgatctctggggagggacgatga

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