Nocardioides rotundus: K8W59_19715
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Entry
K8W59_19715 CDS
T07669
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nro
Nocardioides rotundus
Pathway
nro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8W59_19715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_19715
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8W59_19715
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K8W59_19715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
DnaJ_CXXCXGXG
AAA_21
AAA_29
AAA_16
nSTAND1
Anti-TRAP
AAA_33
NB-ARC
AAA_22
DUF4350
Viral_helicase1
cobW
DUF5351
Motif
Other DBs
NCBI-ProteinID:
UAL29919
LinkDB
All DBs
Position
complement(4000571..4002937)
Genome browser
AA seq
788 aa
AA seq
DB search
MTTDATDGFVRVRGANENNLRNIDVDIPRNVMVAFTGISGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLLQQVGAPHVQEITGLPPAVALQQRRGAATSRSSVGTITTLSNLLRILYSR
AGDYPAGADHLAAEAFSPNTSAGACPRCHGLGVVHDVTEELLVPDPSLSIREGAIAAWPG
AWQGANLRSIVMGLGIDVDKPWHSLRKRDRDWLLFTDEQPSVLIEPEPGRVDHGYYGKFW
SARSHVMHVLADSTSERMRERAMRFVEEAPCPDCQGSGLRPEALAVTFLGRSIAEVNDLP
FTALVALLRPVAERPAGADVVAARICTDLVTRVEVLLDLGLGYLSLGRSSTTLSPGEAQR
LRIATQLRSGLFGVVYVLDEPFAGLHPADAEPLLDVLDRLKASGNTLFVVEHDLDVVRRA
DWVVDIGPGAGEAGGRVLHSGPVAGLEDVTESATSAYLFGRAERLVHDARGPQGWLRLTG
VDRHNLRDLSVDIPLCVLTAVTGVSGSGKSTLVTQVLAEDPTARESFDRLVLVDQRPIGR
TPRSNLATYTGMFDAVRKLYAATDAARARGYGAGRFSFNVAGGRCETCQGEGFVSVELLF
LPGTYAPCPTCHGNRYNPETLQITYRGKSIAEVLDLSVDDATTFLADVPAAARSLRTLRE
VGLGYLRLGQPATELSGGEAQRIKLATELQRAHRGHALYLLDEPTSGLHPADIALLLRQL
HRLVDAGNTVVLVEHDLDAIATADWVIDLGPAGGDAGGRVVATGTPADIARAEGSATAPY
LSRRLERT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccgatgcgaccgatggctttgtgcgtgtccgcggtgccaatgagaacaacctg
cgcaacattgacgtggacattcctcgcaacgtgatggtggcgttcaccgggatctctggg
tcggggaagtcgtcgctggccttcggaacgctgtacgccgaggcgcagcgccgctacttc
gagtcggtcgcgccctacgcgcgccggctgctgcagcaggtcggtgccccgcacgtccag
gagatcaccggcctgccgcctgcggtcgcgcttcagcagcgccggggcgcggccacctca
cgctcgtcggtcggcaccatcaccacgctgtccaacctgctgcggatcctctactcgcgg
gccggcgattacccggctggtgccgatcacctcgcggccgaggcgttctcgcccaacacc
agcgcgggcgcgtgcccacgctgccacggcctgggcgtcgtccacgacgtcactgaggag
ctcctagtcccggacccgtcactgagcatccgtgaaggggcgatcgccgcctggccgggc
gcgtggcagggcgccaacctgcgcagcatcgtgatggggctcggcatcgacgtcgacaag
ccgtggcacagtctcaggaagcgcgaccgcgactggctgctgttcaccgacgagcagccc
tcggtgctcatcgagccggaaccaggtcgcgtcgaccacggctactacgggaagttctgg
agcgcgcgcagccacgtcatgcacgtgctggccgactccacgagcgagcggatgcgcgag
cgggccatgcggttcgtggaggaagcgccctgcccggattgccagggcagtggactacgg
cctgaggccctcgcggtgacctttctcgggcgttcgatcgccgaggtcaacgacctgccc
ttcacagcgctggtggctctgctgcgtccggtcgctgagcggcccgcgggtgccgacgta
gtcgcggcgcggatctgcactgacctggtcacgcgcgtcgaggtgctcctcgatctgggc
ctgggttatctcagcctgggacggagctcgacgacgctgtcgcccggagaggcgcagcgc
ctgcggatcgccacccagctgcgctcgggcctgttcggagtcgtctacgtcctggacgag
cccttcgccggcctgcacccggccgacgcggagccgctgctggatgtcctggaccgcctc
aaggcgtccggcaacacactgttcgtcgtggagcacgacctcgacgtcgtacgacgagca
gattgggtcgtcgatatcggcccgggtgcgggcgaggccggaggtcgagtgcttcacagc
ggccctgtcgcgggcctggaggacgtgactgagtcggccaccagcgcctacctgttcggt
cgcgctgagcggctcgtccacgatgcgcggggcccgcagggctggctgcgactgaccggc
gtagatcgccacaacctgcgcgacctgtctgtcgatatcccgctgtgcgtgctcaccgcc
gtcaccggggtgtccgggtccggcaagtcgaccctggtcacccaggtcctggccgaggac
ccgactgctcgtgagtcattcgaccgactggtactggtcgatcagcgcccgatcggccgg
acgccgcggtccaacctcgcgacgtacacggggatgttcgatgccgtgcggaagttgtac
gccgccacggacgcggcccgggcccgcggctacggcgccggccgcttctccttcaacgtc
gccgggggccgctgcgagacctgtcagggcgagggattcgtctccgtcgagctactgttt
ctgcctggcacctacgctccctgcccgacgtgccacggcaatcgctacaaccccgagacg
ctccagatcacctaccgcggcaagagcatcgcggaggtcctcgacctgtccgtcgacgac
gccaccacgttcctggccgacgtaccggccgccgcacgcagcctccggacgcttcgcgag
gtgggtctgggctacctgcgacttggacagccggcgaccgagctcagcggcggggaggca
cagcgcatcaagctcgccaccgagctccagcgcgctcaccgcggccatgccctctacctg
ctcgacgagccgacctccggactccaccccgcagacatcgctctgctgctgcgccagctg
caccggctcgtcgacgccggcaacacggtggtcctcgtcgagcacgacctcgacgcgatc
gccaccgcggactgggtcatcgatctcggtccggccggaggagatgccggcggtcgggtt
gtcgcgaccggcacgccggccgacatcgcgagggccgagggcagcgcgaccgcgccctac
ctctcgcggcggctcgagcggacatga
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