Novosphingobium rhizosphaerae: R9J51_00785
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Entry
R9J51_00785 CDS
T11371
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
nrz Novosphingobium rhizosphaerae
Pathway
nrz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R9J51_00785 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrz03400
]
R9J51_00785 (uvrB)
DNA repair and recombination proteins [BR:
nrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R9J51_00785 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R9J51_00785 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
Kinesin
DUF87
AAA_22
AAA_33
nSTAND_NTPase5
SWI2_SNF2
Microtub_bd
AAA
SRP54
Motif
Other DBs
NCBI-ProteinID:
XVN46715
LinkDB
All DBs
Position
166120..168306
Genome browser
AA seq
728 aa
AA seq
DB search
MAEIIIRRGLEEPDTSGNFVPHKPQRPEKLEPGRPFKVVSDYSPAGDQPTAIADLVASAR
EGERTQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEMKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMVFDLKKGESVDQGEIVRKLVALQYKRNDHAFQRGTFRVRGDNLEIFPSHYED
TAWRISFFGDEIEDIAEFDPLTGKADTRLSQVRVYANSHHVTPGPTLMQAREAIKFELAE
RLKELQAEGKLLEAQRLEQRTHFDLEMMAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMARGDHRRKMTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
FAVSATPGNWEMEQSGGVFAEQVIRPTGLIDPPVLIRPVEDQVQDCINECRLTAQNGYRT
LVTTLTKRMAEDLTEFMHEAGLRVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAIAETD
RRREKQNAYNELHGITPATIKRQIADIIADTASRDGVLVDLDDDTTNNLVGHNLRSHIED
LEKRMRNAAADLEFEEAGRLRDEIRRLEATELGLPEGEHKAPIVGRSNEGKPGTRKTRYG
KSQKKWGK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaatcatcatccgcagggggctggaagagcccgacacatccggcaacttcgtg
ccgcacaagccccagcgaccggaaaagctggagccgggccgcccgttcaaggtggtgtcg
gactatagcccggccggcgaccagcccactgcgatcgccgatctcgtggccagcgcgcgc
gagggggagcgcacgcaagtgctgctgggcgtcaccggctcgggcaagaccttcaccatg
gccaaggtgatcgaggaattgcagcgccccgccctgatcctggcgcccaacaagatcctc
gcggcgcagctctatggcgagatgaagagcttcttccccgaaaacgcggtggaatatttc
gtctcgtactacgattattaccagcccgaagcctatgtgccgcggtcggacacctacatc
gagaaggaaagctcggtgaacgaggcgatcgaccgcatgcgccactcggcaacgcgcgcg
ctgctcgaacgcgatgacgtgatcatcgtcgcttcggtctcgtgcctctatggcatcggc
tcggtcgaaacctattcggccatggtgttcgacctcaagaagggcgaaagcgtcgaccag
ggcgagatcgtgcgcaagctggtggccttgcagtacaagcgcaacgaccatgcgttccag
cgcggcacgttccgcgtgcggggcgacaacctcgagatcttcccctcgcactacgaggac
accgcctggcgcatcagctttttcggcgacgaaatcgaagacattgccgaattcgatcca
ctgaccggcaaggccgacacgcggttgtcgcaagtgcgcgtttacgccaactcgcaccac
gtcacgcccggtcccacgctgatgcaggcgcgcgaggcgatcaagttcgaactggcagag
cggctcaaggagcttcaggccgagggcaagctgctggaagcgcagcggctggagcagcgc
acccatttcgacctggaaatgatggccgccaccggatcgtgcgcggggatcgaaaactat
tcgcgcttcctcaccgggcgcctgccgggcgagccgccgccgaccctgttcgaatacctg
cccgacaatgccctgctgttcgtggacgaaagccaccagaccgtgccgcagatcggcgcc
atggcgcggggcgaccaccgccgcaagatgacgctggccgaatatggcttccgcttgccc
agttgcatcgacaaccgtccgctgcgcttcaacgaatgggacgcgatgcgcccgcagacg
tttgccgtttcggcaacgccaggcaattgggagatggagcaatcgggtggcgtctttgcc
gaacaggtgatccgccccaccggcctgatcgatccgccggtgctgatccgcccggtcgaa
gaccaggtgcaggactgcatcaacgaatgccgcctcaccgcacagaacggctatcgcacc
ctggttaccacgctgaccaagcgcatggccgaggacctgaccgagttcatgcacgaagcg
ggcctgcgcgtgcgctacatgcactccgacgtggagacgctggagcgcatcgaactgatc
cgcgacttgcgcctgggcgtctatgacgtgctggtggggatcaacctgctgcgcgagggg
ctcgacattcccgaatgcgggctggtctgcattctcgacgcggacaaggaaggtttcctg
cgttcggaaacctcactgatccagaccatcggccgagccgcgcgcaacgtggacgggcgc
gtgatcctctatgccgaccgcatgaccgggtccatggaacgcgcgattgccgaaaccgat
cgccgccgtgaaaagcagaatgcctacaacgagttgcacggcatcaccccggccacgatc
aagcgccagattgccgacatcatcgccgatacggccagccgcgacggcgtgctggtggat
ctggacgacgacaccaccaacaatctcgtcggccacaacctgcgcagccacatcgaagac
ctggaaaagcgcatgcgcaatgccgccgccgatctggaattcgaagaagcgggccgcctg
cgcgacgagatccgccgcctggaagcgaccgaactcggcctgcccgaaggcgagcacaag
gcgcccatcgtgggccgcagcaacgaaggcaagcccggcacccgcaagacccgctacggc
aagtctcaaaagaagtgggggaagtaa
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