Novosphingobium rhizosphaerae: R9J51_01145
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Entry
R9J51_01145 CDS
T11371
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nrz Novosphingobium rhizosphaerae
Pathway
nrz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R9J51_01145 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nrz03400
]
R9J51_01145 (ung)
Enzymes [BR:
nrz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
R9J51_01145 (ung)
DNA repair and recombination proteins [BR:
nrz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R9J51_01145 (ung)
Prokaryotic type
R9J51_01145 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
XVN46781
LinkDB
All DBs
Position
242436..243122
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AA seq
228 aa
AA seq
DB search
MSAVPESWAPALDPVLASPPLRALGGFLRAEEAAGKTIYPPRGQRLAALELTPLQAVKVV
ILGQDPYHGPGQAHGLAFSVQRGVKVPPSLVNIYKELETDLGLPRPAHGNLTHWAEQGVL
LLNNALTVEAGQAGSHQGKGWEEFTDAAVAAVAARPDPIVFLLWGSHAQKKAARVPGLAS
GPHLVLKAPHPSPLSAHAGFFGCRHFSKANAFLESHGQSPIDWRVDPA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcggttcctgaaagctgggcacccgccctcgatccggtgctcgccagcccgccc
ttgcgggcgctgggtggtttcctgcgtgccgaggaagccgccggcaagacgatctacccg
ccgcgagggcagcgcctcgctgccctcgaactgacgccactgcaggcagtgaaagtcgtg
atcttggggcaagacccctatcacggccccggtcaggcgcatggcctggccttttcggtg
cagcgcggcgtcaaagtgccgcccagcctggtcaacatctacaaggaactggaaaccgac
ctcggtctgccgcgcccggcgcatggcaatctcacccattgggcggagcagggcgtgctg
ctgctcaacaacgcgctgacggtggaagccggccaggccggttcgcaccagggcaagggc
tgggaggaattcaccgacgcggccgttgctgccgtcgcggcacggcccgatccgatcgtc
ttcctcctatggggcagccacgcccagaaaaaggccgcacgcgtgcccggcctcgcctcc
ggcccccatctcgtgctcaaggcaccgcatcccagccccttgtcggcccacgccggcttc
ttcggctgccgccatttcagcaaggccaacgctttcctggaaagccacgggcagagcccg
atcgactggcgagtagacccggcatga
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