Novosphingobium rhizosphaerae: R9J51_03895
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Entry
R9J51_03895 CDS
T11371
Name
(GenBank) transcriptional repressor
KO
K09823
Fur family transcriptional regulator, zinc uptake regulator
Organism
nrz Novosphingobium rhizosphaerae
Pathway
nrz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nrz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R9J51_03895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nrz03000
]
R9J51_03895
Transcription factors [BR:
nrz03000
]
Prokaryotic type
Helix-turn-helix
Fur family
R9J51_03895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FUR
DUF5132
Dimerisation
TrmB
HTH_IclR
WHD_RNase_R
WHD_TBPIP
Motif
Other DBs
NCBI-ProteinID:
XVN47287
LinkDB
All DBs
Position
846556..847017
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AA seq
153 aa
AA seq
DB search
MGGHHHHDYAGEGLVSAAREALTVSGEQWTDMRADVFSALAAQERPASAYDIAESVGQRR
GKRVAANSVYRILDLFVRTNLARRVESANAYVANTHPGCRHDCIFLICDVCGQVTHIDND
SLTGHLREAARHAGFADVRPVVEIRGRCQACAG
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgggtggccaccatcatcacgattatgccggcgaagggctggtatccgccgcgcgcgaa
gcgctgaccgtttcgggcgaacagtggaccgacatgcgcgccgatgtgttcagcgcgctg
gccgcgcaggaacgcccggcgtctgcctatgacatcgccgaaagcgtggggcagcgccgg
ggcaagcgcgtggccgccaacagcgtctatcgcattctcgacctgttcgtgcgcaccaac
ctggcgcgccgggtggaaagcgccaatgcctatgtcgccaacacccatcccggctgccgg
cacgactgcatcttcctgatctgcgacgtgtgcggccaggtgacccatatcgacaacgac
agcctgacgggccacttgcgcgaggctgcgcgccatgccggctttgccgacgtgcgcccg
gtggtggaaatccgcggccgctgccaggcctgcgcaggctga
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