Novosphingobium rhizosphaerae: R9J51_17815
Help
Entry
R9J51_17815 CDS
T11371
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nrz Novosphingobium rhizosphaerae
Pathway
nrz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nrz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R9J51_17815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nrz03021
]
R9J51_17815
03400 DNA repair and recombination proteins [BR:
nrz03400
]
R9J51_17815
Enzymes [BR:
nrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R9J51_17815
Transcription machinery [BR:
nrz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R9J51_17815
DNA repair and recombination proteins [BR:
nrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R9J51_17815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XVN46148
LinkDB
All DBs
Position
complement(3952613..3953674)
Genome browser
AA seq
353 aa
AA seq
DB search
MTVNIKNWQELKKPNNLEIKPGHDPKRRATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSAIGPGEVKAGDI
AVTGDIEVMNKDLVICHLDEGATFNMELTCDTGKGYVPAVSNRPVDAPIGLIPVDSLYSP
VRQVSYKVDNARIGQELDYDKLSLSVETDGTVTPEDAVAYAARILQDQLALFVHFDDQVP
TGHVPSLAGVAAHAPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTE
AEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatcaagaactggcaggaactgaagaagcccaacaatctcgaaatcaag
cccggccacgatccgaagcgtcgcgcgactttcgttgccgaaccgcttgagcgtggcttt
ggtcttaccctcggcaacgcgctgcgccgggtgctgctctcttcgcttcagggggctgcg
gtcacgtcgatcaagatcgagaacgtgctgcatgaattctcgtcgctcgccggcgtgcgc
gaagacgtcaccgacatcgtgctcaacgtcaagcagatcgcgctcaagatgcagggcgaa
ggccccaagcgtcttcagctttccgcgatcgggcctggcgaagtcaaggccggcgacatc
gccgtgaccggtgacatcgaggtgatgaacaaggacctggtgatctgccacctggatgaa
ggcgcgaccttcaacatggaactcacctgcgacaccggcaagggctatgtccccgccgtg
tcgaaccgtccggtcgatgcccccatcggcctcatcccggtcgactcgctctattcgccc
gtgcgccaggtctcctacaaggtggacaacgcgcgtatcggccaggagttggactacgac
aagctgagcctttcggtggaaaccgatggcacggtgacgccggaagacgccgtggcctat
gccgcgcgcattcttcaggaccagctggccctgttcgtccacttcgacgaccaggttccc
accggccacgtgccgtcgctggccggtgttgccgcccatgcgccggaagaaagcgacgcc
aaccagctcaaccgctaccttctcaagaaggtggacgaactggaactgtcggtgcgttcg
gccaactgcctcaagaacgacaacatcatctacatcggcgacctggtccagaagaccgag
gccgagatgctccgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtg
ctctcgtcgatgggcctgcgcctcggcatggacatccctggctggccgccggaaaacatc
gaggaaatggccaagaagctggagcaggagcttttgggctga
DBGET
integrated database retrieval system
