Novosphingobium rhizosphaerae: R9J51_20350
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Entry
R9J51_20350 CDS
T11371
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
nrz Novosphingobium rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
nrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nrz03000
]
R9J51_20350
Transcription factors [BR:
nrz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
R9J51_20350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
DUF6262
TetR_C_16
Motif
Other DBs
NCBI-ProteinID:
XVN48870
LinkDB
All DBs
Position
pLY1:complement(45300..45848)
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AA seq
182 aa
AA seq
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MKVSREQMAENRRRILKVASALFREKGIEAVSVAEVMKAAGLTHGGFYGHFRSKDDLVAQ
ALANALAADSFENGSFSDFVRAYLAPRHRDNPGGGCPTAGLAAAMRHQTPAAKATMTEGL
RTQIARIEHALPALPAADKRTAAIGSWAAMVGAVILARAVDDPQLSDEVLERTRAWIDAA
VR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcagcagagagcagatggcggaaaaccgtcgccgaattctgaaagtcgccagc
gccttgttcagggaaaagggcatcgaggcggtgagtgtcgcggaggtgatgaaggcggca
ggcctcacccatggcggcttttacgggcatttccgctcgaaggacgatctggtggcgcag
gcgcttgcgaacgcgcttgcagcggacagtttcgagaacggaagcttcagcgattttgtc
cgggcctatctggccccgcgacaccgggataatcccggcggcggttgcccgaccgccggc
ctcgccgctgccatgcgccaccagacgcctgcagcgaaagccaccatgacggaagggctg
cgaacgcagatcgcgcgcatcgaacatgcgcttccggcgttgcccgcagcggacaagcgt
accgctgcaatcggaagctgggcggcgatggttggggcggtcatcctggcgcgggccgtc
gatgacccacaattgtcggacgaggtgctcgagcgaacgcgcgcatggatcgacgctgcc
gtcaggtag
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