Nitratifractor salsuginis: Nitsa_0354
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Entry
Nitsa_0354 CDS
T01405
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nsa
Nitratifractor salsuginis
Pathway
nsa03030
DNA replication
nsa03430
Mismatch repair
nsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nitsa_0354
03430 Mismatch repair
Nitsa_0354
03440 Homologous recombination
Nitsa_0354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsa03032
]
Nitsa_0354
03400 DNA repair and recombination proteins [BR:
nsa03400
]
Nitsa_0354
Enzymes [BR:
nsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nitsa_0354
DNA replication proteins [BR:
nsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nitsa_0354
DNA repair and recombination proteins [BR:
nsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nitsa_0354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADV45624
UniProt:
E6WZW6
LinkDB
All DBs
Position
361012..364563
Genome browser
AA seq
1183 aa
AA seq
DB search
MSEHPRFTHLHLHTEYSLLDGANKIKALAKKVKALGMDSVAMTDHGNMFGTIDFYNTMRK
EGVKPIIGMEAYLHNSDDLGDKSTRQRYHLCLYAKNEIGYKNLMYLSSQAYLKGFYYYPR
INKKLLREHSEGLICSSACLQGEVNWHLNLSDRNKKFGAGGYEEAKKIALEYKEIFGDDF
YLELMRHGIGDQQRIDEQIIRLSLETGIKIIATNDTHYTNPEDAEAHEAFMCIAMNKQYD
DPNRLRHSVHEFYVKSPEEMARLFADIPEALENTQEIAEKCNLEIKLGNPTPPNFKFTRE
RAKLAGLELPEPEEEYSLANDIVLFEHEARKGLEKRLEHVPEEKHAEYRERLETEIGIIN
SMKFPGYMLIVWDFVRAAKEMGIPVGPGRGSAAGSLVAYSLSITDIDPIPYGLLFERFLN
PERVSMPDIDMDFCQSRRQEIIDYVVEKYGRVNVAQIITFGKLLAKGVIRDVARVMGLPY
AQADAFAKLIPDELGITLKDAYAKEPKIKELIERDPKAAQVWRFALALEGLNRNAGTHAA
GVVISNEPLWEKTPLFKPTGQETLATQYSGKYVEDVDLIKFDFLGLKTLTTIEEALQLIE
KRHGKRIDFKQVDINDPKVYDYIATGNTLGLFQIESAGMQDLAKKLKPSSFEDIIAMLAL
YRPGPMESGMLDDFVERKHGRAEITYMFPELEPILKPTYGVIVYQEQVMQIVQTIGGFSL
GGADLVRRAMGKKIKEEMDKLKGQFADGAEKKGFDRAKAEELFDLIVKFAGYGFNKSHSA
AYAMVTFYTSYLKCYYPTEFMAAQLTLEKDNTTKVVRYVDAVKHMGIDLLPPDVNRSDLA
FIADEIEGRPTILFGLGGVKGAGDVAIRSILESREEGPFRDLSDFISRIDTAKVNKKVIE
AFIKAGALDGLGYTRKAMLTQIEAIMEAASKATQAKKMAENSLFGAGEEMTHVELELDPM
EEFDPLQMLEFEKETLGFYVSGHPLDKYREELAKIDYTLSSEIDELADGSQALFIGKIES
ITEKISKKGNKFGIANVMDLHGNIELMLFADRLKELEEEFDLSKPIAFKVKVTKDGDFTR
MNILKIETLKEARKEKVKVKKEQKHTEAPEEQPPVILALDLMPDPKIIEELYCLAERNPG
PHPLQLQIRSKLADVVIESKVHVSRSIIEAARSLGITPAEKSA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacacccccgatttacccatctgcacctgcataccgaatattccctgctcgac
ggggccaacaagatcaaagccttggccaagaaggtcaaagccctggggatggattccgtc
gctatgaccgaccacggcaatatgttcggtaccatcgacttttacaatacgatgcgcaaa
gagggggtcaaacccatcatcgggatggaagcctacctccacaacagcgatgacctgggg
gataaatcgacccgccagcgctaccacctctgcctctatgccaagaacgagatcggctac
aaaaacctgatgtatctcagctcccaggcttatctgaaaggcttctactactacccgagg
atcaacaaaaagctgctgcgggaacacagcgaggggctgatctgctcttccgcctgcctg
cagggagaggtcaactggcacctcaaccttagcgaccgcaacaagaaattcggggcaggg
ggctatgaagaggccaaaaagatcgccctggaatacaaagagatcttcggcgacgatttc
tatctggagctgatgcgtcacggcatcggggatcagcagcgtatcgacgagcagatcatc
cgcctctctttggagacggggatcaagatcatcgccaccaacgacacccactacaccaac
cccgaggatgccgaggctcacgaagcctttatgtgcatcgcgatgaacaaacagtatgac
gaccccaaccgcctacgccacagtgtccacgaattctatgtcaaatcccccgaggagatg
gcgcggctctttgccgacatccccgaagctctggagaatacccaggagatcgccgagaag
tgcaatctggagatcaagctgggcaatcccacaccgcccaacttcaaatttaccagagag
cgagccaagctggcggggctggagcttcctgaaccggaagaggagtactccctggccaac
gacatcgtgctcttcgaacacgaggcgcgcaagggattggaaaaacgcctcgaacacgtg
cccgaagagaagcatgccgaataccgggagcgtctggagaccgagatcggcatcatcaac
tcgatgaaattccccggctatatgctgatcgtctgggacttcgtccgggccgccaaggag
atggggattcccgtcgggccgggccgggggtcggccgccggatcgctggtggcctacagc
ctctccatcaccgacatcgacccgatcccctacggcctgctcttcgagcgtttcctcaac
cccgagcgtgtgagcatgcccgatatcgatatggatttttgccagagccgtcgccaggag
attatcgactatgtggtggagaagtacggccgggtcaacgtggcccagatcatcaccttc
ggtaagcttctggccaagggggtcatccgggatgtcgcccgggtgatggggctgccctat
gcccaggccgacgcctttgctaagctgattcctgacgagctggggatcaccctcaaggat
gcctacgccaaagagcccaagatcaaagagctcatcgagcgggaccccaaggcggcccag
gtgtggcgattcgccctggccctggaggggctcaaccgcaacgcgggcacccacgccgcc
ggggtggtcatctccaacgaacctctctgggaaaagacgcccctcttcaagcccacgggc
caagagaccctggcgacccaatacagcggcaagtatgtcgaggatgtggacctgatcaaa
ttcgacttcttggggctcaagaccctgacgacgatcgaagaggcgctccagctcatcgag
aagcgccacggaaagcggatcgacttcaaacaggtcgatatcaacgaccccaaggtctac
gactacatcgccaccggcaataccctggggctcttccagattgaatcggcggggatgcag
gatttggccaaaaagctcaaacccagcagtttcgaagatatcatcgcgatgctggcgctt
tatcgtccggggccgatggagtcggggatgctcgatgatttcgtggagcgcaagcacggc
cgggcggaaatcacctatatgttccccgaactcgagccgatcctcaagcccacctacggc
gtcatcgtctatcaggaacaggttatgcagatcgtccagaccatcggagggttcagtctc
ggcggggcggacctggtgcgccgggcgatgggaaaaaagatcaaagaagagatggacaag
ctcaagggccaattcgccgacggggcagagaaaaagggcttcgaccgtgccaaagccgag
gagctcttcgacctgatcgtcaaattcgccggctacggattcaacaaatctcactccgcc
gcctatgcgatggtcaccttctatacctcttatctcaagtgctactaccccacggagttt
atggcggcccagctgaccctggagaaggacaacaccaccaaggtggttcgctacgtcgat
gcggtcaagcatatggggatcgacctgctaccccccgatgtcaaccgctccgacctggcc
ttcatcgccgacgagatcgagggacgcccgacgatcctcttcggcctgggaggggtcaaa
ggggcgggcgacgtcgccatccgctccatcctcgaatcacgcgaggaggggccctttagg
gatctgagcgatttcatctccaggatcgacactgccaaggtcaacaagaaggtgatcgaa
gccttcatcaaggcgggggctctcgacggcctgggctatacccgcaaagcgatgctgact
cagatcgaggcgatcatggaggcggcttccaaggcgacccaggcgaagaagatggcggag
aattccctttttggcgctggagaggagatgacccatgtggagttggagctcgacccgatg
gaagagttcgatcccctgcagatgctggagttcgagaaggagacgctgggcttctacgtc
tcgggccaccccctcgataagtaccgtgaggaattggccaagatcgattacaccctcagc
tccgagatcgacgaattggccgacggatcccaggcgctcttcatcggcaagatcgaatcg
atcaccgagaagatcagcaaaaagggcaacaaattcggcattgccaatgtgatggacctc
catgggaacatcgagctgatgctttttgccgaccggctcaaggaactcgaagaggagttc
gacctgagcaaacccatcgccttcaaggtcaaagtgaccaaagacggtgactttacccgg
atgaatatcctcaagatcgaaaccctcaaagaggcccgcaaagagaaggtcaaggtcaag
aaggagcaaaaacacaccgaagcccccgaagaacagcctccggtgatcctggcactggac
ctgatgcccgatcccaagatcatcgaagagctctactgcctggcggagcgcaatcccggc
ccccatcccctgcagctccagatccgctccaagctggcggatgtggtgatcgaatccaaa
gtccacgtcagccgctccatcatcgaagcggctcgaagcctgggaatcacaccggcggag
aagagcgcatag
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