Nitratifractor salsuginis: Nitsa_0889
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Entry
Nitsa_0889 CDS
T01405
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nsa
Nitratifractor salsuginis
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsa03016
]
Nitsa_0889
Enzymes [BR:
nsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Nitsa_0889
Transfer RNA biogenesis [BR:
nsa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Nitsa_0889
Prokaryotic type
Nitsa_0889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADV46149
UniProt:
E6X305
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All DBs
Position
893909..895033
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AA seq
374 aa
AA seq
DB search
MNKEQSKIQNPKSKISNPWLFPTAQKNDFVFTPSPRDFTVKEIPLYEFSGEGEHLIVQVR
KKGFSTWELTDRLSNRLGIPRRQIGYAGLKDKHALTTQYLSLPAACEKSLEGMELEGVKI
LDVTRHDNKLRVGHLKGNRFRLRFKKVLGVQKEKIDSVLDWIERWGMPNYFGLQRFGTEG
NNWQEGLALVEGRLKIRERKMREFLISAYQSRLFNDWLSRRIGLSRLLEEFGEREVETIE
KLPAGSLSGVKKQEHFFKILSGDLMMHYPYGRLFPAEDLDSEAAKFAAKDRAPTGLLPGR
KVKRAEGTARLIEELYDGKRISEQGSRRYAWVFPSEIHRRYVPEKAHYELSFTLPKGSYA
TVLVAMLKGKWNEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaagaacaatccaaaatccaaaatccaaaatccaaaatctccaatccctggctc
ttccccaccgcccagaaaaacgacttcgttttcaccccctctcccagggatttcaccgtc
aaagaaattcccctttatgagttttcaggcgaaggggagcacctgatcgtgcaggtgcgc
aagaaggggttctcgacctgggagttgaccgaccggctgagcaaccgtctgggtattccc
aggcggcagatcggctatgcggggctcaaggacaagcacgccttgaccactcagtatctc
tctttacccgccgcttgtgaaaagtcgttggaaggaatggaactggaaggggtgaaaatc
ctcgacgtgacccgtcacgacaacaagctcagggtcgggcatctcaaaggcaaccgcttc
cgcctgcgtttcaaaaaggttttgggggtgcagaaggagaagatcgactccgtgctcgat
tggatcgagcgctgggggatgcccaactacttcggcctccagcgattcggcaccgaaggg
aacaattggcaggagggcctggcgctggtagagggacgcttgaagatccgcgagcgcaaa
atgcgggagttcctcatcagtgcctatcagagcaggctcttcaacgattggttgagccgg
cgtatcgggctgagccggttgctggaagagtttggcgaacgggaggtagaaacgatcgag
aaacttcccgccggatcgctctcaggggtcaaaaaacaggagcactttttcaaaatcctc
tcgggggatctgatgatgcactatccctatggcaggctcttcccggccgaggatctcgac
tccgaagcggcaaagttcgccgccaaagaccgggctcccaccggtctgctgcccggtcgg
aaggtcaagcgggccgaagggactgcccggttgatcgaagagctttatgacggcaagagg
atttcggagcaggggagccgccgatatgcgtgggtctttccatcggagatccaccgccgc
tatgtgccggagaaggcgcattatgagctgagcttcacactgccgaaagggagctatgcg
acggtgctggtggcgatgctgaaagggaaatggaatgaggagtga
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