Nitratifractor salsuginis: Nitsa_1085
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Entry
Nitsa_1085 CDS
T01405
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nsa
Nitratifractor salsuginis
Pathway
nsa03420
Nucleotide excision repair
nsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nitsa_1085
03430 Mismatch repair
Nitsa_1085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsa03400
]
Nitsa_1085
Enzymes [BR:
nsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nitsa_1085
DNA repair and recombination proteins [BR:
nsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nitsa_1085
MMR (mismatch excision repair)
Other MMR factors
Nitsa_1085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADV46341
UniProt:
E6WXT4
LinkDB
All DBs
Position
complement(1098712..1100769)
Genome browser
AA seq
685 aa
AA seq
DB search
MPLSRLNPEQREAATAPFGHNLIIASAGTGKTSTIVGRIAYLLQKGVPPEKILLLTFTNK
AAGEMVTRLKHYFPAQIVDRIEAGTFHAVCYRWLKTRLPQATLKQPGELKTLFRSVYEKR
DMKRVGYDVKPFSSTYLYELYQLYQNAALGSFDEWFLERCPEQEVWMDIYVDICDEFERT
KEEYGFLSFNDLLLQVKKRLEEGERIPFQEVLVDEYQDTNTLQGALIDALEPASLFCVGD
YDQSIYAFNGANIANIATFTERYPDARVYTLRTNYRSGAAILALANRVIQRNERIYPKEL
IVGKSGKNHPPKLLVFEELFEQYQGIASQIAESATPHTYTAVIFRNNASADGIEASLRER
GIPCRRKGGTSFFEAKEVKFLLDLASLLVNPRDMMAFIHIFEYGRGIGTALAKEIFQCLM
HFGEGDLRRGLLRPAITTLPKLNPNKNTQLGLFDDDLEIGSVTRFAQIEMEEEIRAHPLL
KHPRLNQDSLRFFIKFYRFYRSIDRSQRPATILRKAIASPLYQEIVDQLSAQRGRLKSGE
IDEEKRELARERILRKARLLTDLASHYREMSRFVNAMILGGGEMSEGEGVNLLTVHASKG
LEFEDVYVIDLMDGRFPNRKLMERTGSMEEERRLFYVAVTRAKSRLFLSMAKYDRVKKID
FKPSPFLAEAGLVREENASLLTEPV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagcaggctcaacccggagcagcgtgaagcggcgaccgcccccttcggccac
aatctcatcattgccagcgccggaacgggaaaaacctccactattgtcggacgaatcgcc
tatcttctgcagaaaggtgttcctccagaaaaaattcttctccttacttttaccaacaag
gccgccggagagatggtcacaaggctcaaacactatttccccgcccagatcgtcgatcgg
atcgaagcggggactttccacgcagtctgctaccgctggctcaaaacccgcttgccccag
gcgaccctcaagcaacccggtgagctcaagaccctttttcgcagtgtctacgaaaagcgg
gatatgaagcgtgtgggctacgatgtgaagcctttctcttcgacctatctctacgaactc
tatcaactctaccaaaacgcggccctggggagtttcgacgaatggtttctggagcgttgt
cccgagcaggaggtctggatggatatctatgtggacatctgcgacgagttcgaacgcacc
aaggaggagtacggttttctctccttcaacgatttgctgcttcaggtcaaaaagcgcctg
gaagagggggaacgcatcccttttcaggaggttcttgtcgatgaataccaggataccaac
acactgcagggagctttgatcgatgcgctggagccggcttccctcttttgcgtcggggat
tacgaccagagcatctacgccttcaacggcgccaacatcgccaacatcgctaccttcacc
gagcgttatcctgatgcccgggtctataccctgcggaccaattatcgttccggtgcggcg
atcctcgccctggccaaccgggtgatccagcgcaacgaacggatctaccccaaagagctc
atcgtcggaaaatcggggaagaaccatccgcccaaactcctggttttcgaggagctcttc
gagcagtatcaggggatcgcatcccagatcgccgaatccgccacaccccatacttacacc
gcggtgatctttcgcaacaacgccagtgctgacgggatcgaagccagcctccgggagcgg
gggatcccctgccgccgcaaagggggaaccagctttttcgaagccaaagaggtgaagttt
ctcctggacctcgccagcctgctggtcaaccccagggatatgatggctttcattcatatc
tttgaatatggaagagggatcggcacagccctcgccaaagagatcttccagtgcctgatg
catttcggggaaggggatctcagaagagggcttctgcgccccgcgatcacgacactcccc
aagctcaaccccaacaaaaacacgcagctggggctcttcgatgacgatctggagatcgga
tcggtcacccgcttcgcccagatcgaaatggaggaggagattcgcgcccatcctctgctc
aaacacccgaggctcaatcaggacagcctgaggttcttcatcaagttttaccgcttttac
cggagcatcgaccggagtcaacggcccgccacgatcctgcgcaaagcgatcgcatcgcct
ctctatcaggagatcgtggatcagctctcggcccagaggggtcggctcaagagcggggag
atcgacgaggagaagcgggagctggccagagagcggatcctgcgcaaggcgcggctgctg
acggatctcgcttcccactaccgggaaatgtcccgcttcgtcaacgcgatgatcctcggc
ggcggagagatgagtgagggggagggggtcaatctgttgacggtccatgcctccaaaggc
ttggagttcgaagatgtctatgtgatcgatctgatggacgggcgcttccccaaccgcaaa
ctgatggaacgcaccggaagtatggaggaggagcgccggcttttctatgtggcggtgacc
cgggccaagagccggcttttcctctcgatggccaaatacgatcgcgtcaagaagatcgat
ttcaaaccttcgcccttcctggcggaggccggcctcgttcgggaagagaacgcttcgctc
cttacggagcccgtgtga
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