Nitratifractor salsuginis: Nitsa_1373
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Entry
Nitsa_1373 CDS
T01405
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nsa
Nitratifractor salsuginis
Pathway
nsa03420
Nucleotide excision repair
nsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nitsa_1373
03430 Mismatch repair
Nitsa_1373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsa03400
]
Nitsa_1373
Enzymes [BR:
nsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nitsa_1373
DNA repair and recombination proteins [BR:
nsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nitsa_1373
MMR (mismatch excision repair)
Other MMR factors
Nitsa_1373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_14
eIF3_p135
CarD_TRCF_RID
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
ADV46624
UniProt:
E6WZB2
LinkDB
All DBs
Position
1372804..1374861
Genome browser
AA seq
685 aa
AA seq
DB search
MLDELNDAQREAATHIDGPLLILAGAGSGKTKTLTTRLAYLLGEVGIDPANTLTLTFTNK
AATEMRDRALRMIGDKAAYPPLLCTFHKFGLIFLKFHIERLGRDNRFVIIDSDDKKRLIR
SLAKDQKIDLNLSFLASEISKYKNTLLTPEEVVAKAELPDYKKAARIYQLYQENIEENNL
VDFDDLLMLTYRILEENEDLRKETSQRYQYIMVDEYQDTNELQYKLLRQLCSEHDNLCVV
GDDDQSIYGWRGANIRNILDFHQHFDNTKVVKLETNYRSTRPILEAANALIEHNSKRLGK
KLVSHRGDGPEVELLHSLDEAHEARNIAQKIKGLLAEGVDPDEIAVLYRINALSRSLEEG
FSREGLPFKLIGGMRFYERAEIKDIISYFRVLSNPHDDFSFLRIINKPKRGLGKTSIDKL
MRLAHERQQSLYQAIESSSEAELASAVSKKAAKTLKTLNETIHELQDEAEKSLYNFVDFF
EEKIGLKDFYGSMVDGFERILNIDEFYGYLRDSVMKNPELTLDEFLNDISLQSDQDEVEG
DAITIMSIHAAKGLEFEHLYVIGMEEEFFPLLGDGCNMEEERRLGYVAITRAKTHLTLCY
SDSRFYKGRRKQLEKSRFLGEAGLIQNASLKVTRNAEYKKGDLVKHKIFGIGRVQAVSKS
GKEYKLRINFGGTKKEILSSFVQPA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatgaactgaacgacgctcaacgtgaagctgccacccatatcgacggcccgctt
ttgatcctcgccggagcgggcagcggcaagaccaaaaccctgacgacccgactggcctac
ctcctgggcgaagtgggaatcgatcccgccaataccctcaccctcacctttaccaacaaa
gcggctacagagatgcgtgaccgggctttgcgtatgatcggggacaaagcggcctaccct
cctctgctctgcaccttccacaaattcggcctgatctttctcaaattccatatcgaacgc
ctgggacgggacaaccgattcgtcatcatcgacagcgacgacaagaagcgcctcatccgt
tctctcgccaaagatcagaagatcgacctcaacctctctttcctcgcttcggagatctcc
aaatacaaaaacaccctcctgacccccgaagaggtggtcgccaaggcggagctccccgac
tacaaaaaagccgcccggatctatcagctctaccaggagaacatcgaagagaacaacctc
gtcgacttcgacgatctgctgatgctcacctaccgcatcctcgaagagaacgaggatctt
cgcaaagagaccagccaacgctaccaatacattatggtcgacgagtatcaggataccaac
gaattgcagtataaactcctgcgccaactctgcagcgaacacgataacctctgtgtcgtg
ggggacgacgaccagagcatctacggttggcgaggagccaacatccgaaacatcctcgat
tttcaccagcacttcgacaataccaaggtggtcaagctggagaccaactaccgctccacc
aggcccatcctcgaagccgccaacgccctcatcgaacacaacagcaaacgcctgggcaaa
aagctcgtcagccaccgaggcgacggacccgaggtggaactgctccactctctcgacgaa
gcccacgaagcgcgcaacatcgcccagaagatcaagggcctgctcgccgagggggtcgat
cccgacgagattgccgtgctctaccgcatcaacgccctctcccgttccctcgaagaggga
ttcagccgggaagggttgcccttcaagctcatcggcgggatgcgcttctacgagcgtgcg
gagatcaaggacatcatcagctacttccgtgtcctctccaatccccacgacgacttctcc
ttccttcggatcatcaacaaacccaagcggggcctgggaaagaccagcatcgacaagctg
atgcgcctggcccacgagcgtcagcaatctctctaccaggccatcgagagcagcagcgaa
gcggagctcgcctccgcggtgagcaaaaaggccgccaaaaccctcaaaacgctcaacgaa
acgatccacgaactccaggatgaggcggaaaaatccctctacaacttcgtcgactttttc
gaagagaagattggcctaaaggatttttacggctctatggtcgatgggtttgagcggatc
cttaacatcgacgaattttacggttacctgagggattcggtaatgaaaaaccctgagctc
accctcgacgagttcctcaacgacatctccctgcaaagcgaccaggacgaagtggaggga
gacgccatcaccatcatgagcatccacgccgccaaggggctggagtttgagcacctctac
gtcatcggaatggaagaggagttcttccccctgctgggcgacgggtgcaatatggaagag
gagcgccggctcggttatgtcgccatcacccgggccaagacccatctgaccctctgctac
agcgacagccgcttctacaaagggcgccgcaagcaactggaaaagagccgcttcctgggc
gaagccggcctgatccaaaacgccagcctcaaagtgacccgcaacgccgaatacaaaaaa
ggcgacctggtcaaacacaaaatcttcggcatcggccgggtccaggcggtaagcaaatca
ggcaaagagtacaaactccgaatcaacttcggcggcaccaaaaaagagatcctcagctct
ttcgtccaaccagcgtaa
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