KEGG   Nitratifractor salsuginis: Nitsa_1507
Entry
Nitsa_1507        CDS       T01405                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
nsa  Nitratifractor salsuginis
Pathway
nsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nitsa_1507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsa03019]
    Nitsa_1507
Enzymes [BR:nsa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Nitsa_1507
Messenger RNA biogenesis [BR:nsa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Nitsa_1507
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Fe-ADH P-loop_SecA ERCC3_RAD25_C AAA_22 Helicase_C_2 Flavi_DEAD Shikimate_DH
Other DBs
NCBI-ProteinID: ADV46755
UniProt: E6X032
LinkDB
Position
complement(1510350..1511615)
AA seq 421 aa
MNNTTTTFDTLGLDPAILKAVSAEGYTTPTPIQAQAIPAVLEGHDVLAAAQTGTGKTAGF
TLPLLERLIQNPRQMKARQVRALVLTPTRELAAQVAESVRTYGKNLKIRSTVVYGGVGIE
PQKRAIARGCEIVIATPGRLLDLANQRAIDLSALETLILDEADRMLDMGFIHDIKKIIAQ
TPKERQTLLFSATFSPEIKRLAAGMLKDPVLIEVARQNTTAEQVSQKVHHVDRHRKQELL
IRMIKEKGWKQVLVFTRTKHGANKLSKQLDQAGIPSEAIHGNKTQNARMKALKSFKENRV
RVLVATDIAARGIDIAALPHVVNFELPNVAEDYVHRIGRTGRAGSEGEALSLVCVDEHQL
LRNIERFIKAEIPKIATPGFEVDPSIRPEPIQNGRNNRGRGNSRGRQSAGRSSAGRRRSA
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttgaacaacaccacgactacattcgacaccctcggactcgaccctgccattctcaaagcc
gtttcggccgagggttacaccacccccacccccattcaggctcaggcgatccccgccgtg
ctggaggggcacgacgtcctggcggcggcccaaaccggtaccggcaagaccgccggcttt
accctgccgctgctggagcgtttgatccaaaatccccgccagatgaaagcccgtcaagtc
cgggccctggtgcttacccccacccgggagctggcggcccaggtagccgagagcgtgcgc
acctacggcaaaaacctcaagatccgctccaccgtcgtctacggcggcgtgggcatcgaa
ccccagaagcgggccatcgcccgcggctgcgaaatcgtcatcgccacgccgggccgcctg
ctcgatctggccaatcagcgcgccatcgacctgagcgctctggagaccctgatcctggac
gaagcggaccgtatgctggatatgggcttcatccacgatatcaaaaagatcatcgcccag
acccccaaagagcgtcagaccctgctcttttcggccactttctcccccgagatcaagcgt
ctggcggcaggcatgctcaaagatccggtcctgatcgaagtggcacggcagaataccacc
gccgagcaggtgagccaaaaggtccaccacgtcgatcgccaccgcaaacaggaactgctg
atccggatgatcaaagagaagggctggaaacaggtcctggttttcacccgcaccaagcac
ggagccaacaaactctccaagcagctcgaccaggccggcatcccctccgaggcgatccac
ggcaacaagacccagaacgcccggatgaaggccctcaaaagcttcaaagagaaccgggta
cgcgtcctggtggctaccgatatcgccgccagaggtatcgacatcgccgcgctgccccac
gtggtcaacttcgagctgcccaacgtagcggaggattatgtccaccgcatcggccggacg
ggccgtgccggcagtgaaggggaagccctctccctggtctgtgtcgatgagcatcagctc
ctgcgtaacatcgagcgcttcatcaaggcggagatccccaagatcgccacacccggtttc
gaggtcgatccctccatccgccccgaaccgatccagaacggccgcaacaaccgcggccgg
ggaaacagccgtggccgtcagagtgccgggcgctcctccgccggacgccgccgcagcgcc
cgctag

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