Nitratifractor salsuginis: Nitsa_1540
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Entry
Nitsa_1540 CDS
T01405
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsa
Nitratifractor salsuginis
Pathway
nsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nitsa_1540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsa03019
]
Nitsa_1540
03400 DNA repair and recombination proteins [BR:
nsa03400
]
Nitsa_1540
Enzymes [BR:
nsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nitsa_1540
Messenger RNA biogenesis [BR:
nsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Nitsa_1540
DNA repair and recombination proteins [BR:
nsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nitsa_1540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADV46788
UniProt:
E6X065
LinkDB
All DBs
Position
complement(1538968..1540752)
Genome browser
AA seq
594 aa
AA seq
DB search
MNKLEILKRHFGHQGFRPLQEEAVDAILSRRDLLMILPTGGGKSLCYQLPTLMMPGVTIV
VSPLLALMHDQVTALLEMGIPAAMLGSMQSFEEQQETVRRLRRGELKLLYVAPERLNNDF
FSQLLSTLPINFFVIDEAHCVSEWGHEFREDYRRLSLLRERYPQVPIAAFTATATREVEA
DIASQLGLRDPVRVRGSLYRENLTVSARHRVGDGRAQLLDLLSAHKGESGIVYTLSRKQT
ESLADHLRAKGYSAATFHAGLSAEERRRVYEEFVADKIETVVATVAFGMGIDKSNIRYVA
HMSLPKSVENYYQEIGRAGRDGLEAETLLLFGAQDLLMQRRFIDELPETPYKAHAYAKLE
KLWRLVSGEACRHKALADYFGETLPECGERCDNCLAPAVERLEITEAARKFLAAAWRSGQ
RFGAGYLIDLLRGSRDRRILENGHEALSVYGIGKEYDRKQWSSVADRLLELGGIALNEHK
GVVLTETGAQILKGEREVLIRKERMEKERRTPKPQPIEEVDYDRELFDALRQLRKEIATE
NGVPPYVVFSDKTLRELSIHRPQTQEEMLEVHGIGEVKFERYGEEFLHLLSEWS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttgagatcctcaaacgtcatttcggtcatcaggggttccgtcctttgcag
gaggaggcggtggatgcgattctctccaggcgggatctgctgatgatcctgcccacggga
ggcgggaagtcgctctgctatcagctgcccacgctgatgatgccgggagtgaccatcgtc
gtctctccgctgctagcactaatgcacgatcaagtcacggcgctgctggagatggggatc
cccgcggcgatgctgggatcgatgcagagcttcgaagagcagcaggagacggtgcgtcgg
ctgcggcggggggagctgaagctcctctatgtagccccggagcgtctgaacaatgacttc
ttttcccaacttctctccacccttcccatcaactttttcgtcatcgatgaagctcactgc
gtgagtgagtgggggcacgaatttcgggaggattaccgccgtctctccctgctgcgggag
cgttatccccaggtgcccatcgccgcctttaccgctacggccacccgggaggtggaggcc
gacatcgcttcccaactcgggctcagagatcccgtacgggtgcggggaagtctctacagg
gagaatctcaccgtcagtgcccgtcaccgggtgggagacggccgggctcagctgctcgat
ctgctctcggcccacaagggagagtcggggatcgtctataccctttcgaggaagcagacc
gaatccctggcggatcatctgcgggccaagggatactccgccgccacttttcacgcgggg
ctgagcgccgaggagcgccggcgggtctacgaggaattcgtcgccgacaagatcgagacg
gtggtagcgacggtggctttcgggatggggatcgacaagagcaacatccgctacgtagcc
catatgagcctgcccaagagtgtggagaactactatcaggagatcggccgggcggggcgg
gacgggttggaggcggagacgctgctgctctttggggcgcaggatctgctgatgcagcgc
cgtttcatcgatgagctccccgagaccccctacaaggcccacgcttacgcaaagctggag
aagctctggcggctggtcagcggcgaagcgtgccgccacaaagccctggccgattatttc
ggtgaaactctgcccgagtgcggtgagcgttgcgacaattgcctggctccggctgtggag
cgtctggagatcaccgaggcggcgcgaaagttcctggcggcggcctggcggagtgggcag
cgcttcggcgccggctatctcatcgatctgctgcgggggagccgggaccgcaggattctg
gagaacggacacgaagccctctccgtctacggcatcggcaaggagtatgaccgcaagcag
tggagcagtgtggccgaccggctgctggagctgggagggatcgccctcaacgagcacaag
ggggtggtcctgaccgagaccggtgcgcagatcctcaaaggggagcgggaggtcctgatc
cgcaaagagcgtatggagaaggaacgtcgaactcccaagccccagcctatagaagaggtc
gattacgacagggagctcttcgacgccctgcgccaactccgcaaagagattgctacggaa
aacggagtgcccccctatgtggtcttctccgacaaaaccttgcgggaactctcgatccac
cgccctcaaacgcaggaggagatgctggaggttcacggaatcggagaagtgaaattcgag
cgctacggcgaagagtttttacacttgctgagcgagtggagctga
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