Nitratifractor salsuginis: Nitsa_1892
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Entry
Nitsa_1892 CDS
T01405
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nsa
Nitratifractor salsuginis
Pathway
nsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nitsa_1892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsa03019
]
Nitsa_1892
03110 Chaperones and folding catalysts [BR:
nsa03110
]
Nitsa_1892
03029 Mitochondrial biogenesis [BR:
nsa03029
]
Nitsa_1892
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsa04147
]
Nitsa_1892
Enzymes [BR:
nsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Nitsa_1892
Messenger RNA biogenesis [BR:
nsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Nitsa_1892
Chaperones and folding catalysts [BR:
nsa03110
]
Heat shock proteins
HSP60 / Chaperonin
Nitsa_1892
Mitochondrial biogenesis [BR:
nsa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Nitsa_1892
Exosome [BR:
nsa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Nitsa_1892
Exosomal proteins of other body fluids (saliva and urine)
Nitsa_1892
Exosomal proteins of breast cancer cells
Nitsa_1892
Exosomal proteins of colorectal cancer cells
Nitsa_1892
Exosomal proteins of bladder cancer cells
Nitsa_1892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
divDNAB
Motif
Other DBs
NCBI-ProteinID:
ADV47136
UniProt:
E6X267
LinkDB
All DBs
Position
1862465..1864102
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEIVFSDIARNGLYSGVKKLADAVKVTMGPRGRNVLIQKSFGAPSITKDGVSVAREIE
LADSLENMGAQLVKEVASNTADEAGDGTTTATVLAESIFREGLRNITAGANPIEVKRGMD
KASAAIIEELKKMSKEVSDKEQIAQVATISANSDAKIGNLIAEAMEKVGKDGVITVEEAK
GINDELEVVEGMQFDRGYLSPYFVTNSEKMTVEMDNPLILITDFKISSLKDLIPLLEQTQ
QSGRPLLIIADDVEGEALATLVLNRLKGILNIAAVKAPGFGDRKKEMLKDIAILTGGTVI
TEELGLTLEKTTIDQLGQAARVVIDKDDTTIVDGKGSKEAVEARIREIKAQIENTTSDYD
REKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVDEGIVIGGGAALVK
AAKAVEISLEGDEQVGAEIILRAVKAPIKQIADNAGFDAGVVADKVSTSEDANLGFNAAT
GEYVNMFEAGIIDPLKVERVALQNATSVASLLLTTEATVSEIKEDKPAPAAPDMGMGGMG
GMGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaatcgtcttttcagatatcgcacgtaacggactctacagcggagtcaaa
aaactggccgacgcggtcaaggtcacgatgggaccccgcggacgtaatgtcctgatccag
aagagcttcggcgctcccagcattaccaaggacggcgtctctgtcgcccgggagatcgag
ctggccgattctctggaaaatatgggagctcagctggtcaaagaggtcgccagcaatacc
gcggacgaagccggtgacggtaccaccaccgccaccgttctggcggaaagcatcttccgc
gaaggtctgcgcaatatcaccgcaggggccaaccccatcgaagtgaagcgaggtatggac
aaagccagcgccgccatcatcgaagagctcaagaagatgagtaaagaggtcagcgacaaa
gagcagatcgctcaggttgccaccatctccgccaatagcgatgccaaaatcggtaacctc
atcgccgaggcgatggaaaaagttggtaaagacggcgtcatcaccgtcgaagaggccaaa
ggaatcaacgacgaactcgaagtcgtcgagggtatgcagtttgatcgtggttatctctcg
ccctacttcgtcaccaacagtgagaagatgaccgtcgagatggacaacccgctgattctc
atcaccgacttcaagatcagcagcctcaaagacctgatccctctgctcgagcagacccag
cagagcggacgcccgctgctgatcatcgctgacgatgtcgaaggtgaagctttggcgact
ctggtcctcaaccgcctcaagggcatcctcaacatcgccgccgtcaaagcccccggcttc
ggcgaccgcaagaaggagatgctcaaggatatcgctatcctcactggcggtaccgtcatc
accgaagagctcggtctgaccctggagaagaccaccatcgatcagctcggtcaagccgcc
cgtgtcgtcatcgacaaagatgataccaccatcgtcgacggtaaaggcagcaaagaggcg
gtcgaagcccgcatccgcgagatcaaggctcagatcgagaacaccactagcgactacgac
cgcgagaagctccaggagcgcctggctaagctcagcggtggtgtcgctgtcatcaaggtc
ggtgccgctaccgagaccgagatgaaagagaaaaaagaccgcgtcgacgacgccctctcc
gcgaccaaagcggctgtggatgagggaatcgttatcggcggaggtgccgcattggtcaaa
gccgccaaagcggtcgaaatcagcctcgaaggtgacgagcaggtcggtgcggagatcatc
ctgcgcgccgtcaaagctcccatcaagcagatcgcagacaacgccggcttcgacgccgga
gtcgtcgctgacaaagtcagcaccagcgaagacgccaacctcggtttcaacgctgccacc
ggcgaatatgtcaatatgttcgaagccggtatcatcgatcctctgaaagtcgagcgggtc
gcactgcaaaatgccacctctgtcgccagcctcctgctgacgaccgaagcgaccgtcagc
gaaatcaaagaggacaaacccgctcccgccgctcccgatatgggaatgggcggaatgggc
ggaatggggatgatgtaa
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