Nitratifractor salsuginis: Nitsa_2049
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Entry
Nitsa_2049 CDS
T01405
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nsa
Nitratifractor salsuginis
Pathway
nsa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nitsa_2049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsa03400
]
Nitsa_2049
DNA repair and recombination proteins [BR:
nsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nitsa_2049
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nitsa_2049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF87
SWI2_SNF2
Microtub_bd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADV47290
UniProt:
E6X377
LinkDB
All DBs
Position
2022348..2024321
Genome browser
AA seq
657 aa
AA seq
DB search
MPKFKVQAPYQPAGDQPEAIEKLAASIEAGNRYQTLLGVTGSGKTHTMARIIEKTQRPTL
IMTHNKTLAAQLYSEFKSFFPNNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSVNAELER
LRLSATASLLSHDDVIVIASVSANYGLGSPEEYRSIVQKIVVGEEYNQRELLLKFVEMGY
KRNDDFFDRGDFRVSGEAIDIYPAYSEELAYRIEFFGDEVEAIIGFDALTGEKVHELKEF
TLYSANQFIVGREKMVRAIKSIEEELGERLKFYEREGRMVEYNRLKQRTEFDLEMLETTG
VCKGIENYSRHLTGKKPGETPYSLLDYFEAMHRDYLVMVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKFEEYIDKAPAYLFVSATPGEWETEHSAVIAEQVVRPTGLL
DPEIEVIDSENQVAHLHDRIKEVTTRGERVLVTVLTKKMAEELTTYYNDLGLRVKYMHSD
LDAIERNQIIRSLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETALIQTA
GRAARNVHGKVLMYAKRITPSMQACIETTRARRQKQIEYNQKHGITPKTTVRELDTDLKV
AEPGELYNRHSKTDKMPKAERQRIVKELKAKMLSAAKKLDFEEAARLRDEIAKIKKL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattcaaagtccaggcaccttatcagcccgccggcgaccagcccgaagccatc
gagaaactggccgcttccatcgaagccggcaaccgctatcagaccctgctgggtgtcacc
ggatcgggtaaaacccacactatggcacggatcatcgagaagacccagcgccccaccctc
atcatgacccacaacaagactctggcggcccagctctacagcgaattcaaaagcttcttt
ccgaacaaccacgtcgaatatttcatcagctactacgactactaccagcctgaagcctac
attccccgccaggacctcttcatcgaaaaagacagctccgtcaacgccgagctggaacgg
ctacgtctgagcgccacggccagcctgctgagccacgacgacgtcatcgtcatcgcctct
gtcagtgccaactacggcctgggaagccctgaggagtaccgcagcatcgtccagaagatc
gtcgtgggcgaagagtacaaccaacgcgaactcctgctcaaattcgtggagatgggctac
aagcgcaacgacgacttctttgaccgaggggatttccgggtcagcggggaagcgatcgac
atctaccccgcctacagcgaagagctggcctatcggatcgaattcttcggcgacgaggtg
gaagcgatcatcggtttcgacgccctgacgggagagaaggtccacgagctcaaggagttc
accctctacagcgccaaccagttcatcgtgggcagggagaagatggtccgggccatcaag
agcatcgaagaggagctgggcgagcgactgaaattctatgagcgagagggccggatggtg
gagtacaaccgcctcaaacagcgtaccgaattcgacctggagatgctggagaccaccggc
gtctgcaaggggatcgagaactactcacgccacctgacgggcaagaagccgggcgagacc
ccctattccctgctggattatttcgaagcgatgcacagggattatctggtgatggtggat
gagtcccacgtgagcctgccgcagtttcgtgggatgtacgccggggaccgcagccgcaag
gaggtgttggtggagtacggtttccgcctccccagcgccctggataaccgccccctgaaa
ttcgaagagtacatcgacaaagcccccgcctacctcttcgtctccgccacaccgggagag
tgggagacggagcactccgccgtcatcgccgagcaggtggtgcgcccgacggggctgctg
gacccggagatcgaagtgatcgacagcgaaaaccaggtcgcccacctccacgaccggatc
aaggaggtcacgacacggggcgagcgggtcctggtgacggtgctgaccaaaaagatggcc
gaggagctcaccacctactacaacgacctgggcctgcgggtgaaatatatgcactccgac
ctggatgccatcgagcgcaaccagatcatccgctccctgcgtctgggagagtttgatgtc
ttggtggggatcaacctgctccgcgaagggctcgacctccccgaagtgagcctggtggcg
atcctcgatgccgacaaagagggctttttgcgcagcgaaaccgccctcatccagaccgca
ggccgggcagcgagaaatgtccacggcaaggtgctgatgtacgccaagcggatcaccccc
tcgatgcaagcctgtatcgaaactacccgggcccggcgccaaaagcagatcgaatacaac
caaaaacacggcatcacccccaaaaccaccgtccgggaactcgacaccgacctgaaggtg
gccgaaccgggcgaactctacaaccgccactccaaaacggacaagatgcccaaagccgaa
cgccagcgcatcgtcaaagagctcaaggccaagatgctctcagcagcgaaaaagcttgat
tttgaagaggcggccaggctaagggatgagattgccaagatcaagaagctctaa
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