Natronomonas salina: HWV07_05140
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Entry
HWV07_05140 CDS
T07280
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nsal
Natronomonas salina
Pathway
nsal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HWV07_05140 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsal03021
]
HWV07_05140 (tfe)
Transcription machinery [BR:
nsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
HWV07_05140 (tfe)
Prokaryotic type
Archaeal type
TFE
HWV07_05140 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
Sigma70_r3
DUF7129
Zn_ribbon_8
Zn_ribbon_6
Zn_ribbon_TFIIB
HypA
Motif
Other DBs
NCBI-ProteinID:
QLD88449
LinkDB
All DBs
Position
919223..919756
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AA seq
177 aa
AA seq
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MAFEELLNDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFQYENIPEQLEEEMHRLLDALESRRDYERDNEFYLCG
NCQLRFEFGEAMEFGFECPDCGGPLETMDNQRLINAMDSRIEELRDELNVDEEPAEA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggaactgctgaacgacccggtgattcagaagtacctccacgagctggtc
ggtccgacggggatgcccgtcgccgccgcgccgccggacggcgaggtcaccgacgaggag
ctcgcggaggaactggggctggagctcaacgacgtccgccgggcgctgttcatcctctac
gagaacgacctcgcctcctaccggcggctccgggacgaggactcggggtggctgacgtac
ctgtggaccttccagtacgagaacatcccggagcaactcgaggaggagatgcaccggctg
ctcgacgccctggagtcccgccgcgactacgagcgggacaacgagttctacctctgcggc
aactgccagctccgcttcgagttcggcgaggccatggagttcggcttcgagtgtccggac
tgcggcggcccgctcgagacgatggacaaccagcggctcatcaacgcgatggacagccgc
atcgaggaactgcgcgacgaactgaacgtggacgaggagcccgcggaagcctga
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integrated database retrieval system