Natronomonas salina: HWV07_06080
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Entry
HWV07_06080 CDS
T07280
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nsal
Natronomonas salina
Brite
KEGG Orthology (KO) [BR:
nsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsal03032
]
HWV07_06080
03400 DNA repair and recombination proteins [BR:
nsal03400
]
HWV07_06080
Enzymes [BR:
nsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HWV07_06080
DNA replication proteins [BR:
nsal03032
]
Prokaryotic type
DNA Topoisomerases
HWV07_06080
DNA repair and recombination proteins [BR:
nsal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HWV07_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
Cdd1
IMS_HHH_1
LexA_DNA_bind
DUF4332
EH_Signature
HHH
Zn_Ribbon_TF
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QLD88623
LinkDB
All DBs
Position
1102489..1104993
Genome browser
AA seq
834 aa
AA seq
DB search
MELIVTEKDNAARRIAEILSDGGASAERRNGVNVYRWGDKRCVGLSGHVVGVDFPPEYSD
WRDVQPVELVDAQVVKTPTQENIVRTLQQLAADADEAVIATDYDREGELIGKEAYELIDE
VADVPIKRVRFSSITENEVKNAFANPDDLDFDLAAAGEARQIIDLLWGAALTRFLSLSAK
QLGDDFISVGRVQSPTLKLIVDREREIQAFDPDDYWELFADLQKDDEEFESQYFYREDGT
ENERLWDEERASETFEQLQGAREAIVESVNRRRRTDDPPEPFNTTQYIRAAGSLGLSAQK
AMSVAEELYTAGYITYPRTDNTVYPDDLDPEELLEDFVGHHPFGDDAEALLEADEVDPTS
GDEETTDHPPIHPTGEIPGKQDLSDDEWKVYELVVRRFFATVADAAEWEHLKVVADANGC
LLKSNGKRLVEAGYHDVYPYFSTSENYVPAVEEGEVLDVTEARIEEKQTQPPRRRGQSRL
IETMEDLGLGTKATRHNTLQKLYDRGYIESDPPRPTKLAMAVVEAAEEFADRIVDEDMTA
QLEADMRAIAEGEKGLEDVTEESREMLSVIFDELHDSREEIGEHLRESMKADKTLGPCPE
CGEDLLVRRSRRGSYFVGCDGFPECENTLPLPSQGEPTVLDERCEEHDLRHVKMLAGRST
YVHGCPRCKAEEADEADDEVIGACPECGDEHDGELAIKQLRSGSRLVGCTRYPDCEYSLP
LPRRGDIVVTEETCDEHGLPHLHVRDGEDDDDPWELGCPICNYAEYQERQAASEIEDLDG
VGAKTAEKLAAAGIESLEDLQGADAASVASEVQGVSEDRIREWQTQASAGAAAD
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
gtggaactcatcgtcaccgagaaggacaacgccgcccgccggatcgcggagatcctctcc
gacggcggcgcgtcggccgaacggcgcaacggcgtcaacgtgtaccgctggggcgacaag
cgctgcgtcggcctctccggccacgtcgtcggcgtggacttcccgcccgagtactccgac
tggcgggacgtccagcccgtcgagctggtcgacgcccaggtcgtgaagacgccgacccag
gagaacatcgtccggaccctccagcagctcgcggcggacgccgacgaggccgtcatcgcg
accgactacgaccgcgagggcgagctcatcggcaaggaggcctacgaactcatcgacgag
gtcgcggacgtcccgatcaagcgcgtccgcttctcctccatcacggagaacgaggtgaag
aacgcgttcgcgaaccccgacgacctcgacttcgacctggcggcggccggcgaggcccgc
cagatcatcgacctgctgtggggcgcggcgctgacgcgcttcctgtcgctgtcggccaag
cagctcggcgacgacttcatctccgtcggccgggtgcagtcgccgacgctgaagctcatc
gtcgaccgcgaacgggagatccaggcgttcgaccccgacgactactgggagctgttcgcc
gatctgcagaaggacgacgaggagttcgagtcccagtacttctaccgcgaggacggcacg
gagaacgagcgcctctgggacgaggagcgcgcctcggagaccttcgagcaactgcagggc
gcccgcgaagccatcgtcgagtcggtcaaccgccggcgccgcaccgacgacccgccggag
ccgttcaacaccacccagtacatccgcgcggccgggtcgctcgggctgtcggcccagaag
gccatgagcgtcgccgaggagctgtacaccgccggctacatcacctacccgcggaccgac
aacacggtctaccccgacgacctcgaccccgaggagctgctcgaggacttcgtcggccac
caccccttcggcgacgacgccgaggcgctgctcgaggccgacgaggtcgacccgacctcg
ggcgacgaggagacgaccgaccacccgccgatccacccgaccggcgagatccccggcaag
caggacctctccgacgacgagtggaaggtctacgaactcgtcgtccggcggttcttcgcg
acggtcgccgacgcggccgagtgggagcacctgaaggtcgtcgccgacgccaacggctgc
ctgctgaagtccaacggcaagcggctcgtcgaggccggctaccacgacgtctacccgtac
ttctcgacctccgagaactacgtccccgccgtcgaggagggcgaggtgctcgacgtcacc
gaggcccgcatcgaggagaagcagacccaaccgccccgccggcgcggccagtcgcggctc
atcgagacgatggaggatctcggcctcgggacgaaggcgacccggcacaacaccctccag
aagctctacgaccgcggctacatcgagagcgacccgccgcggccgacgaagctggcgatg
gcggtcgtcgaggccgccgaggagttcgccgaccgcatcgtcgacgaagacatgaccgcc
cagctcgaggccgacatgcgcgccatcgccgagggcgagaagggcctcgaggacgtcacc
gaggagtcccgcgagatgctctcggtcatcttcgacgagctccacgactcccgcgaggag
atcggcgagcacctccgcgagtcgatgaaggccgacaagaccctcggtccctgccccgag
tgcggcgaggacctcctcgtccggcgctcgcgccgcgggtcgtacttcgtcggctgcgac
ggcttccccgagtgcgagaacaccctcccgctgccgagccagggcgagccgaccgtcctc
gacgagcgctgcgaggagcacgacctccggcacgtcaagatgctcgccggccggagcacc
tacgtccacggctgcccgcgctgcaaggccgaggaggccgacgaggccgacgacgaggtc
atcggcgcctgccccgagtgtggtgacgaacacgacggcgaactcgccatcaagcagctc
cgctcgggctcccggctcgtcggctgcacccgctaccccgactgcgagtactcgctgccg
ctgccccgccgcggcgacatcgtggtgacagaggagacctgcgacgagcacggcctcccg
cacctccacgtccgcgacggcgaggacgacgacgacccctgggagctgggctgtcccatc
tgcaactacgcggagtaccaggagcgacaggccgcctcggagatcgaggacctcgacggc
gtcggcgccaagaccgccgagaagctcgccgccgccggcatcgagtccctcgaggacctc
cagggcgccgacgccgcctcggtcgccagcgaggtccagggcgtctccgaggaccgcatc
cgcgagtggcagacccaggccagcgcgggcgcggccgcggactga
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